<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP02983

Description Uncharacterized protein
SequenceMASKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQADMRHWPFKVISGPAEKPMIVVNYKGEEKQFSAEEISSMVLTKMREIAEAFLGTSVKNAVVTVPAYFNDSQRQATKDAGVISGLNVMRIINEPTAAAIAYGLDKKASSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDITGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGVDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSNVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEEHKKKVDAKNALENYAYNMRNTIKDEKIASKLDAADKKKIEDAIDQAIEWLEGNQLAEADEFEDKMKELESLCNPIIARMYQGGDMGGAGGMDDDAPAGGSGGAGPKIEEVD
Length648
PositionUnknown
OrganismBrassica oleracea var. oleracea
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Brassicales> Brassicaceae> Brassiceae> Brassica.
Aromaticity0.06
Grand average of hydropathy-0.433
Instability index32.92
Isoelectric point5.14
Molecular weight71100.66
Publications
PubMed=24916971

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
ATPase activity	GO:0016887	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP02983
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     102.83|      23|      26|      33|      55|       1
---------------------------------------------------------------------------
   13-   31 (27.94/19.63)	..DLG..TTYSCVGVWQHDRVEI
   33-   55 (40.58/32.17)	ANDQGNRTTPSYVAFTDSERLIG
   57-   78 (34.31/25.95)	AAKNQVAMNPTNTVF.DAKRLIG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      73.68|      24|      27|     572|     598|       2
---------------------------------------------------------------------------
  572-  595 (39.88/31.33)	DK.KKIEDAIDQAIEWL.EGNQLAEA
  600-  625 (33.80/16.77)	DKmKELESLCNPIIARMyQGGDMGGA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      55.24|      18|      41|     337|     356|       4
---------------------------------------------------------------------------
  337-  356 (25.55/20.79)	VHDVVLVGGSTRipKVQQLL
  381-  398 (29.70/16.91)	VQAAILSGEGNE..KVQDLL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      36.50|      11|      25|     534|     544|       5
---------------------------------------------------------------------------
  534-  544 (18.85/10.85)	EDEEHKKKVDA
  560-  570 (17.65/ 9.74)	KDEKIASKLDA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      73.01|      23|      26|     458|     482|       6
---------------------------------------------------------------------------
  458-  482 (36.09/22.51)	DNNllGKFELSGIPPAPRGVPQITV
  487-  509 (36.91/18.00)	DAN..GILNVSAEDKTTGQKNKITI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      53.62|      17|     189|     170|     188|       7
---------------------------------------------------------------------------
  170-  188 (22.05/23.78)	GLNVMRIINePTaAAIAYG
  362-  378 (31.58/21.59)	GKELCKSIN.PD.EAVAYG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      50.03|      15|     398|     110|     127|       8
---------------------------------------------------------------------------
  110-  127 (22.88/21.10)	NYKGeekQFSAEEISSMV
  511-  525 (27.15/16.23)	NDKG...RLSKEEIEKMV
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP02983 with Med37 domain of Kingdom Viridiplantae
Unable to open file!