<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP02957
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MYGPATKHGNGYTYESSFVHAGGPTHPSPAKSALLTITTHGVIRMFWSQNTNRLEETTMELESISASDELITHASFASEKKHLLLAVATTSKQLKLIKIEIQWGQASQADKATGRPAGNLSPSLVEKHLATTNWLQGGPGDSSLDISMIELSHLEVLPSVVDSTGKNTTPPMVVTARSRTPTESSYQGSQSVVDRWEAIEQKQNLPSAYEQLGGRRNSISSELPAVTQLQKVAPVTANKVVVAFQTTSFGKILVLAFADGTVEYRDRLTFEELYTTQELNKVQNLRQIGWTFTDEGPCQQVAFSPTFCSMVQMGEDGKIKWNKLHYPMGDIGNSMHDAQYCGSIAALTVTAAPSMFYQNNYDDLLAIVRPYTTKKRFVQDLVTELIRILKIQIDYSEEIHHDSLVRNGSLQYCLSIMNALGFRGDFHPRSFQGKFSMLFLNVRNVVVLITIASNTPVTVREKLSPLDDPEVIETLVGCARWALDLIAWLMDCLFELMNDNHFQELLTRERFHELAPYLHEKNNVAFHFLMSSSSRGFLSAICRRLAHLEALSGRAIEFYRKQSAVVEGVAGGRAAPQLQQAYQAMQQVTSSALVKVSEVETLLTGLSNEIRQAYQIFLPSLAKSQNNQSQGKQLDMTMKAARVQMELSILLSAAPPAPFLQIIKKFFNTDLPAFRNTVDPGRLFFANYDLLEVEDDEHSLAAKKARGMVYVDVFKRMQIRPSPNKQWRRCSRCTAVMEDVFGSRSGFTFVLGQQRKCSCGGQWTLLPKGHVA |
Length | 772 |
Position | Tail |
Organism | Fusarium oxysporum f. sp. lycopersici (strain 4287 / CBS 123668 / FGSC 9935 / NRRL 34936) (Fusarium vascular wilt of tomato) |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes>
Hypocreomycetidae> Hypocreales> Nectriaceae> Fusarium>
Fusarium oxysporum species complex.
|
Aromaticity | 0.08 |
Grand average of hydropathy | -0.207 |
Instability index | 47.06 |
Isoelectric point | 7.93 |
Molecular weight | 86102.40 |
Publications | PubMed=20237561
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Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
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GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP02957
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 54.56| 17| 30| 566| 583| 4
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566- 583 (25.74/21.24) VEGVAGGrAAPQLQQAYQ
599- 615 (28.82/18.40) VETLLTG.LSNEIRQAYQ
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 254.04| 88| 281| 94| 196| 5
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94- 196 (119.95/123.74) LKLIKIEIQWGQASQADKATgrPAGNLSPSlvekhLATTNWLqGGPGD...SSLD..ISMIelsHLEVLPSVVDSTGKNTTpPmvVTARSR.TPTESSyQGSQSVVD..RW
386- 481 (134.09/88.97) IRILKIQIDYSEEIHHDSLV..RNGSLQYC.....LSIMNAL.GFRGDfhpRSFQgkFSML...FLNVRNVVVLITIASNT.P..VTVREKlSPLDDP.EVIETLVGcaRW
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