<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP02956
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MSDPAGEIVHITQGYIPLSKVLTRLAQSTHNALQDQIAALAKMPLPAAAMNGNSTVLNSDVEDGSGENIAKKTSILNFAMREHRKWVKALVITEWSRKADMVSKLIDLRFHLQGQEVLFSGALDVMGHVKRDLTFARMPSPDLKTALQVLSTGEAAWMPDLSYIEPPPLTRQEQIQWISDLDTQLSLRLNLEDFDKIPYHFRNYEIDSGRVTFKVAGEFEVDLTIADEDFEKQFWFIDFRFAFEPAASSIPDGLKNYLEGQVNDILSKDGLLGCYQFLHELVLTHKLNELKRQAIRLSRGSWTGTLKVEPLNRALAIQYWTSRAQLGSPKSWILIAVNSGRKPNGQPDPKSSSHLMAKWYRDNKEVKDTNISFDADNLSAETLLKTVIGRHVEFLLGSIHSRLQAFPRFQNRDAAMILNISHDDPATSFLSMQVGYKDSASLLVEPTTGVFAVKPHSKFTIQHEHLLNNGKNPADDGATCLENVRCGVMEDELIRRGSTTGWNTKKSPLSKDELRSLTNTREWTKTIWLQRTGWDPNWFVMVMLSPSGDAWWLVDASRNANGQSNRLSSKLPLNKGYPHLEDEFWNNLTLFATGMIAQAVDQHELYRHNIKFLLQDTRNWSLPQQVRLPTLEISLSDIFPSMVFNMAEKDNAKAANEFNAGTETARLGPVAPTASTPGISTRQPWAHDIVSIRFKGVEPVDKEASGAGGPISDVSFMCISDAIIKVRKPTKFAMLKGHMVGRDVSWKARTGEFCLRMRSNIGLSILENLKARVKAVDRFVSFFESLDKARGFIKAESVSLKEVTFSYGPPASQTVEDAEVSRLWRVALNLSNNDIDIQVQETNPHLPVTDLMQKLVNGANGIGALMDWLPASLPTMEAFKKIREAWSDIEARRQGRFKFIMNSTDEMSFQYLLAGTGPGNQQVQRSITFLGQIKQRRGEPWWHIERKIPSSGWPSLNDEFSAALKPVWDGKGDDWSGLVTGATGRPENGIIGLLLAIDEAIRPLAGSTSQNNSEVVILE |
Length | 1019 |
Position | Tail |
Organism | Fusarium oxysporum f. sp. lycopersici (strain 4287 / CBS 123668 / FGSC 9935 / NRRL 34936) (Fusarium vascular wilt of tomato) |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes>
Hypocreomycetidae> Hypocreales> Nectriaceae> Fusarium>
Fusarium oxysporum species complex.
|
Aromaticity | 0.08 |
Grand average of hydropathy | -0.328 |
Instability index | 33.12 |
Isoelectric point | 6.55 |
Molecular weight | 114094.53 |
Publications | PubMed=20237561
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP02956
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 165.75| 48| 300| 235| 283| 1
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235- 283 (81.89/60.72) WFIDFRFAFEPAASSIPDGLKNyLEGQVNDILSKDGLLGCY.....QFLHELVL
538- 590 (83.85/56.82) WFVMVMLSPSGDAWWLVDASRN.ANGQSNRLSSKLPLNKGYphledEFWNNLTL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 52.37| 17| 19| 315| 331| 3
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315- 331 (29.42/18.94) LAIQYWTSRAQLG..SPKS
333- 351 (22.95/13.00) ILIAVNSGRKPNGqpDPKS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 116.91| 35| 51| 408| 458| 4
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423- 458 (57.27/65.46) DDPATSFLSMQVGYKDSASLLVEPTTGvFAVK..PHSK
475- 511 (59.64/32.09) DDGATCLENVRCGVMEDELIRRGSTTG.WNTKksPLSK
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 164.85| 49| 253| 660| 713| 5
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660- 713 (84.33/55.82) AGTetarlGP....VAPTASTPG.ISTR..QPWAHDIVSIRFKGVEPVDKEASGAGGPISD
914- 969 (80.52/44.31) AGT.....GPgnqqVQRSITFLGqIKQRrgEPWWHIERKIPSSGWPSLNDEFSAALKPVWD
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 55.89| 17| 33| 107| 126| 6
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107- 126 (25.53/22.60) DLRFHLQgqeVLFSGALDVM
142- 158 (30.37/17.75) DLKTALQ...VLSTGEAAWM
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