Description | Uncharacterized protein |
Sequence | MNRADASTNWKEYTSPDGRKYYYNKVTNLSTWSLPEELKLAREQVEMASAKGPLSDVSSHIPAPVPPASKAQSGADTPSTIIQGASSSPVPVAPVPSSSKIESVVVSGSDLPVATSSTVTNVDVVQIVEDTITPSVAVSESSEVSLSVADAATTLMNNISKVSSLDMVSSEGVSTQNADETVKDVVVSEKINNALEEKAIDQESLTYASKQEAKDAFKALLESANVGSDWTWDQAMRVIINDKRYGALRTLGERKQAFNEFLGQKKKQDAEERRIKQKKAREEYKKMLEECLELTSSTRWSKAVTMFENDERYKAVEREKDRKDFFENYIDELRQKERVKAQEQRKQNVMEYRRFLESCDFIKANSQWRKVQDRLETDERCSRLDKIDRLEIFQEYIRDLEKEEEEQRRIQKEELRKTERKNRDEFRKLVEGHVAAGTLTAKTHWRDYCMMVKDSPPFLAVASNTSGPTPKDLFEDVAEELQKQYDDDKARVKDAVKLRKICLASTWTLEDLKAAILEDISSPPISDVNLKLIFEELLERVKEKEEKEAKKRKRLADDFFDLLHSMKEITSSSAWEDCKHLLESSQEFSSIGDEDICKGIFDEYVKQLKGDAKEKERRRKEDKAKKEKERDERERRKEKHGRDKERGYEREKEEHLREEPSEAHGDISEVHDENENKRSGKEDSKKHRKRHQSSVDNSNETEKDRTKTHRHSSDRRKSKKHASTPESDNESRHKRHKRDHRNGSRRNLDPEELEDGEFGERESQ |
Length | 764 |
Position | Unknown |
Organism | Gossypium raimondii (New World cotton) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Malvales> Malvaceae> Malvoideae> Gossypium. |
Aromaticity | 0.05 |
Grand average of hydropathy | -1.140 |
Instability index | 54.25 |
Isoelectric point | 5.92 |
Molecular weight | 88221.04 |
Publications | PubMed=23257886 |
Annotated function |
|
GO - Cellular Component | |
GO - Biological Function | |
GO - Biological Process | mRNA cis splicing, via spliceosome GO:0045292 IEA:InterPro |
Binary Interactions |
Repeats | >MDP02931 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 6| 381.24| 65| 65| 489| 553| 1 --------------------------------------------------------------------------- 182- 267 (52.60/28.23) ...VKDVVVSEKInnaleekaidqeslTYASK......Q.....EAK.DAFKALL..E.saNVGSDWT.WDQAM.RV...IINDkrygalrtLGERK....QAFN....E.FLGQKKK 279- 346 (59.34/32.87) KAR.EEYKKMLEE..............CLELT..sstrW.....S.....KAVTMfeN...DERYKAVeREKDR.KD...FFEN........YIDEL....RQKE....RvKAQEQRK 352- 411 (65.74/37.28) YRRFLESCDFIKA................NSQ......WrkvqdRLEtDERCSRL..D...KIDRLEI.............FQE........YI.RD....LEKE....E.EEQRRIQ 417- 487 (55.08/29.94) KTERKNRDEFRKL..........veghVAAGTltakthW.......R.DY.CMMV..K...D..SPPF.LAVAS.NTsgpTPKD........LFEDV....AEEL....Q.KQYDD.. 489- 553 (102.53/62.61) KARVKDAVKLRKI..............CLAST......W.....TLE.DLKAAIL..E...DISSPPI.SDVNL.KL...IFEE........LLERV....KEKE....E.KEAKKRK 567- 628 (45.94/23.65) ..........KEI..............TSSSA......W.......E.DCK.HLL..EssqEFSS..I.GDEDIcKG...IFDE........YVKQLkgdaKEKErrrkE.DKAKKEK --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 4| 120.91| 22| 22| 704| 725| 2 --------------------------------------------------------------------------- 649- 668 (28.57/13.25) EREK.E.EHLRE...EPSEAHGDIS 672- 695 (25.00/10.58) DENENK.RSGKEdsKKHRKRHQSSV 704- 725 (36.56/19.23) DRTKTH.RHSSD..RRKSKKHASTP 728- 750 (30.79/14.91) DNESRHkRHKRD..HRNGSRRNLDP --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 73.53| 21| 29| 58| 86| 3 --------------------------------------------------------------------------- 58- 78 (42.34/36.48) SSHIP.APVPPASKAQ....SGADTP 87- 112 (31.19/11.74) SSPVPvAPVPSSSKIEsvvvSGSDLP --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) ELEDGEF 2) GRKYYYNKV | 752 18 | 758 26 |
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Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab