<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP02929
Description |
Uncharacterized protein |
Sequence | MANNSQPSSAQPHWPPAVGSMGPQSYGSPLSSQFRPVVPTQQGQHFVPAASQQFRPVGQVPSPNIGMPAVQNQQMQFSQPMQQFPPRPNQPGLSTPSQQPIQFAPSSFGLPQNNVSAPSQFHPISQVHAPVAPVAGQPWLSTGNQNVSLATPTQHTSQQPPPSSADTNANVPSLTPQSSDWQEHTSADGRRYYYNKRTRQSSWEKPLELMTPIERADASTVWKEFTTPEGRKYYHNKVTKESKWTIPEELKLAREQAQAASSQGTPSGSGVAPQAPVATAVSAAETPTTAIPVSSNTLQDSSPVSVTPVANPSPTSVSGPTTGPVAQSAAMSATGVQLPVVSVTPVPAVPSRGSTVSAPSVGATTAVTRSSETTATQDTMHFADGASAQDIEEAKKGMATAGKVNMTPVEEKVPDDEPLVYANKLEAKNAFKSLLESANVQSDWTWEQTMREIINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRMRQKKAREEFTKMLEESKELTSSMRWSKAQSLFENDERFKAVERARDREDLFENYIVDLERKEREYAAEEKRRNIAEYRKFLESCDFIKANSQWRKVQDRLEDDERCSRLEKIDRLLIFQDYIHDLEKEEEEKKKMQKEQLRRAERKNRDAFRKLMEEHVADGTLTAKTYWRDYCLKVKELPQYLAVASNTSGSTPKDLFEDVAEELDKQYHEHKTRIKEAMKTGKVTMVYSWTFEDFKAAISEDVGSSSISDINLKLVYDELLERAKEKEEKEAKKRQRLADDFTRLLHTYKEITASSDWEESKPLFEESQEYRYFTLIFALKINNRLFIIFLTFMILSSFDGFLPCFLLDQLRKKALGERSLRNTLHTYRRKLKKRSVNERRKRLKRRKIEKRKINGKRRRRRERRRKENGRGKKVKTEVKKMKQIVRI |
Length | 919 |
Position | Unknown |
Organism | Gossypium raimondii (New World cotton) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> malvids> Malvales> Malvaceae> Malvoideae> Gossypium.
|
Aromaticity | 0.08 |
Grand average of hydropathy | -0.864 |
Instability index | 59.21 |
Isoelectric point | 9.48 |
Molecular weight | 104620.79 |
Publications | PubMed=23257886
|
Function
Annotated function |
|
GO - Cellular Component | integral component of membrane GO:0016021 IEA:UniProtKB-KW
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GO - Biological Function | |
GO - Biological Process | mRNA cis splicing, via spliceosome GO:0045292 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP02929
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 54.52| 15| 17| 92| 106| 1
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92- 106 (30.35/14.76) GLSTPSQQPIQFAPS
148- 162 (24.17/10.32) SLATPTQHTSQQPPP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 51.40| 15| 15| 860| 874| 2
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860- 874 (26.22/17.43) RRKLKKRSVNERRKR
877- 891 (25.19/16.43) RRKIEKRKINGKRRR
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 165.44| 36| 38| 174| 209| 3
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174- 209 (68.68/34.36) LT...P.....QSSDWQEHTSADGRRYYYNKRTRQSSWEKPLEL
210- 250 (59.31/28.80) MT...PieradASTVWKEFTTPEGRKYYHNKVTKESKWTIPEEL
252- 287 (37.45/15.82) LAreqA.....QAASSQGTPSGSGVAPQAPVATAVSAAETP...
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
6| 428.69| 63| 66| 491| 553| 4
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426- 483 (74.35/57.82) ..EAK....NAFKSLL.E...SANVQSDWTWEQTMREIINDKRYGAL...KT..LGERKQAFNEYLG....QR.KKLE
491- 553 (101.02/82.05) QKKAR....EEFTKMLEE...SKELTSSMRWSKAQSLFENDERFKAV...ER..ARDREDLFENYIVD..LER.KERE
559- 620 (89.90/71.95) KRRNI....AEYRKFLES...CDFIKANSQWRKVQDRLEDDERCSRL...EK..I.DRLLIFQDYIHD..LEK.EEEE
633- 701 (80.57/63.47) ERKNR....DAFRKLMEEhvaDGTLTAKTYWRDYCLKVKELPQYLAVasnTS..GSTPKDLFEDVAEE..LDK.QYHE
706- 759 (46.70/32.70) IKEA..........M..K...TGKVTMVYSWT.....FED...FKAA.isEDvgSSSISDINLKLVYDelLERaKEKE
762- 803 (36.15/23.13) EAKKRqrlaDDFTRLLHT...YKEITASSDWEESKPLFEESQEYR.................................
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
5| 110.91| 14| 17| 24| 37| 5
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4- 17 (21.21/10.98) NSQPSSAQPHWPPA
24- 37 (25.81/15.27) QSYGSPLSSQFRPV
44- 57 (23.89/13.48) QHFVPAASQQFRPV
63- 75 (18.08/ 8.06) PNIGMP.AVQNQQM
76- 86 (21.92/11.64) Q.FSQPM.QQF.PP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 42.08| 12| 15| 308| 319| 6
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308- 319 (23.18/12.22) PVANPSPTSVSG
324- 335 (18.90/ 8.63) PVAQSAAMSATG
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