<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP02928

Description Uncharacterized protein
SequenceMARRNGERKEHSAMVAVGIDKDKGSQYALKWTVDHLLSKGQSINLVHVKTKPSSIPTPSGLLTNISKVNDDVAKAYMQQVDNQAKEVFLPFRCFCSRKDITSNEIILEDTDIAKALIDYVSSSSIEILVLGAPTKGGFIRRFRSTELTTTVSKGAPNYCTVYVIGKGKISSVRSASAPPPARHHPPAPQPQQPPPSIIPEITESPSGQALFPRYRGAPSRSQHPPRNMYEDLEMKSPFTRPRNKYEPSVPESDISFVSSGRPSTDNMSSLHDNMDFGTQRLSISSEYDSISLGSSYSGNRSIDFSSQYESSSTSHESGRTSWSSQNMMPQDDVEAEMRRLKQELKQTMEMYSAACKEALSAKQRAKELQSWKLQEEQKIEEARLAEEAALSLAEKEKAKCQVAIEAAQAAQMIAELEAQKRKIVEKNANKEADDRKLAINNFGHDLRYRKYTIQEIETATDLFSPSRKIGEGGYGPVYHCNLDHTPVAIKVLRPDAAQGQLQFQQEVEVLCCIRHPNMVLLLGASPEYCCLVYEYMANGSLEDRLFRRNNSPVLPWQVRFRIAAEIATGLLFLHQTKPEPIVHRDLKPGNILLDRNYVSKISDVGLARLVPPSVADTVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDIYSLGIMLLQIITAKPPMGLTHHVENAIENGNFAGILDPAVHDWPMEETLIFAKLALKCSELRRKDRPDLGRVVLPELDKLRTLADEKMPFIKIGGSAGTSPNNSHVSTSSIQVKL
Length764
PositionTail
OrganismGossypium raimondii (New World cotton)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Malvales> Malvaceae> Malvoideae> Gossypium.
Aromaticity0.06
Grand average of hydropathy-0.459
Instability index51.77
Isoelectric point7.87
Molecular weight85057.85
Publications
PubMed=23257886

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP02928
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      85.59|      25|      30|     187|     215|       1
---------------------------------------------------------------------------
  187-  214 (45.19/32.99)	APQPQQPPPSIIPEITESPSGqalF..PR..Y
  217-  245 (40.39/18.19)	APSRSQHPPRNMYEDLEMKSP...FtrPRnkY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      57.06|      18|      30|     260|     289|       2
---------------------------------------------------------------------------
  260-  289 (22.89/37.39)	GRPSTDNMSslhdnMDFgtqrlsiSSEYDS
  293-  310 (34.18/19.34)	GSSYSGNRS.....IDF.......SSQYES
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     111.15|      28|      30|     339|     366|       3
---------------------------------------------------------------------------
  339-  366 (44.53/32.19)	RLKQELKQTMEMYS..AACKEALS..AKQRAK
  372-  399 (32.50/21.48)	KLQEE..QKIEEAR..LAEEAALSlaEKEKAK
  401-  430 (34.12/22.92)	QVAIEAAQAAQMIAelEAQKRKIV..EKNANK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     118.66|      27|      48|     454|     480|       4
---------------------------------------------------------------------------
  454-  480 (47.42/33.94)	QEIETATDLFSPSRKIGEGGYGPVYHC
  483-  503 (24.74/13.82)	DHTPVAIKVLRPDAAQGQLQF......
  505-  530 (46.50/33.12)	QEVEVLCCIRHPNMVLLLGA.SPEYCC
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      58.84|      18|      38|      71|      88|       5
---------------------------------------------------------------------------
   71-   88 (30.68/21.09)	DVAKAYMQQVDNQAKEVF
  111-  128 (28.16/18.80)	DIAKALIDYVSSSSIEIL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      54.10|      16|     704|      38|      55|       9
---------------------------------------------------------------------------
   38-   55 (24.10/22.42)	SKGQSINLVHVKTkpSSI
  745-  760 (30.00/19.61)	SAGTSPNNSHVST..SSI
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP02928 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) GQALFPRYRGAPSRSQHPPRNMYEDLEMKSPFTRPRNKYEPSVPESDISFVSSGRPSTDNMSSLHDNMDFGTQRLSIS
2) SIDFSSQYESSSTSHESGRTSWSSQNMMPQDDVEAEMRRLKQE
3) VRSASAPPPARHHPPAPQPQQPPPSIIPEITESP
207
301
172
284
343
205










Molecular Recognition Features






MoRF SequenceStartStop




NANANA