<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP02906

Description Uncharacterized protein
SequenceMEETSGYTAIAVDKDRNSQLAAKWAVDHLLKPGSKCFFVHVLKSLHPQEFEAIPMEGRPPSEAEMQLYFLSCRGYCSRKGIESHEMVLHGIDVPSTLVDYINNNDIGNIIVGASSRNVLTRKLRNPDVPTSLLKLAPESCGVYVILKGKVQASRLASRSQKSEDSKSTNPHKSQHLKALLSTRTYDNSEIEDISRSSSQRTVSSSKGRSSGITSDRVNDSFQVRPCENLKTNKQVTSPKASKRSKIPESLHRISITERTDFSGPPSCRSTDISSHGSESTAYNSSSLASLTPRGLEVEMKRLRKELKRSMDMFKSVCEEAVVAKDKLKELQEWKEAEERKLEEAKLSEEAAVALAEAEREKTKAAMDAAQTAQRLADMEARKRKLAELKANQEEEEKQRALDKLVNNKAAYRKYTLDDIEAATDYFASAHKIGEGGYGPVFKATLDHTAVAIKILRPDISQGQKQFQQEVEVLSCMRHPHLVLLIGACPEYGCLVYEYMENGSLEDRLFRKDNTPSIPWKIRFRIAAEIATGLLFLHQTKPEPLVHRDLKPANILLDKNYVSKISDVGLSRLVPASIADGVAQYRLTAARGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLLTSKPPVGLTVHIQEAIEKGTFAEMLDPTVPDWPVEEALSLAKLALQCCELRKRDRPDLDSVVLPELNRLRNLELQHEANNSEIQHEANNSEKVASKPPLHISVPEIRSQENQVS
Length737
PositionTail
OrganismGossypium raimondii (New World cotton)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Malvales> Malvaceae> Malvoideae> Gossypium.
Aromaticity0.05
Grand average of hydropathy-0.504
Instability index45.50
Isoelectric point7.28
Molecular weight82254.61
Publications
PubMed=23257886

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP02906
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     111.37|      33|      39|     343|     380|       1
---------------------------------------------------------------------------
  318-  336 (24.88/ 9.95)	.....EEAVVA.....KDKLK.............ELQEWK..EA
  343-  380 (45.16/34.38)	EAKLSEEAAVAlaeaEREKTKaAMD......AAQTAQRLADMEA
  387-  421 (41.34/20.55)	ELKANQE........EEEKQR.ALDklvnnkAAYRKYTLDDIEA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     142.42|      43|      66|     168|     210|       2
---------------------------------------------------------------------------
  168-  210 (71.86/39.81)	TNPHKSQHLKALLSTRTYDNSEIEDIS.RSSSQRTVSSSKGRSS
  236-  279 (70.56/38.97)	TSPKASKRSKIPESLHRISITERTDFSgPPSCRSTDISSHGSES
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     110.98|      35|      61|     545|     580|       3
---------------------------------------------------------------------------
  545-  580 (53.72/40.88)	VHRDLKPANILLDKNYVSKiSDVGLSRLVPASIADG
  608-  642 (57.26/38.87)	VKSDLYSLGVVLLQLLTSK.PPVGLTVHIQEAIEKG
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP02906 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) LQHEANNSEIQHEANNSEKVASKPPLHISVPEIRS
2) NSEIEDISRSSSQRTVSSSKGRSSGITSDRVNDSFQVRPCENLKTNKQVTSPKASKRSKIPESLHRISITERTDFSGPPSCRSTDISSHGSESTAYNSSSLASL
697
187
731
290










Molecular Recognition Features






MoRF SequenceStartStop




1) KIPESLHRIS
245
254