<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP02900

Description Uncharacterized protein
SequenceMAKRNGEKRNESVAVAVAVAVAIDKDKGSQHALKWAVDHLISRGQSITLLHVKTKPSSIPTPSGSHVKMSDVNDEVAKAYKQQLESQAKEVFLPFRCFCSRKDIKCNEVILEDTDISKALIDYVSSFPIETLVLGAPSRSGFVRRFRTAEVTTNVSKGAPDYCTIYVIGKGKISSVRSASAPPPPRPQSQPLLQPQPNNNIPDPTESPSSARAVVNPRHRAPQRPHNPHRNLHEEAEIKSPFTRARNVMKYEPPTPESDISFVSSGKPSSDTMFSSTSDNMEFGNPPRLSSCSDFDNRSMASSVDFSSQYNFSFCSEESDGCMPQDDVEAEMRRLKQELKQTMDMYSAACKEALSAKKKAMELQSWKMQEEQKKEEARVAEKAALSLAETEKAKCNAAIEAAQAAQRIAELEAQKSTNIERKANIDDADDDDMNMALNGFGHHLMYRKYTIEEIEIATDNFSPSRKIGEGGYGPVYHSNLDHTPVAIKVLRPDATQGQSQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLEDRLFMHNNSPVLPWQIRFRIAAEIATGLLFLHHTKPKPLVHRDLKPANILLDHNYVSKISDVGLARLVPPSVANSVTQYRMTSAAGTFCYIDPEYQQTGMLGIKSDVYSLGIMLLQIITAKPPMGLAHRVENAIEEGSFAEILDPAVTDWPLEEALSFAKLALKCAELRRRDRPDLGQVVLPHLIKLRDLAESNMPFMTFGGSAGPSPNNTQVSTSSMLQDFLNQPPQFLHSECDSISSGSD
Length782
PositionTail
OrganismGossypium raimondii (New World cotton)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Malvales> Malvaceae> Malvoideae> Gossypium.
Aromaticity0.06
Grand average of hydropathy-0.444
Instability index57.38
Isoelectric point6.07
Molecular weight86574.19
Publications
PubMed=23257886

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP02900
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      82.85|      24|     101|     654|     678|       1
---------------------------------------------------------------------------
  654-  678 (37.59/26.79)	LLQIITAKPPMGLaHRVENAIEEGS
  758-  781 (45.26/28.17)	MLQDFLNQPPQFL.HSECDSISSGS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      82.78|      25|      28|     331|     355|       2
---------------------------------------------------------------------------
  331-  355 (42.27/33.22)	EMRRLKQELKQTMDMYSAACKEALS
  362-  386 (40.51/31.51)	ELQSWKMQEEQKKEEARVAEKAALS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      78.68|      24|      30|     179|     208|       4
---------------------------------------------------------------------------
  179-  206 (39.25/24.82)	ASAPPPPR...PQsQPllqPQPNNNIPDPTE
  211-  237 (39.43/17.79)	ARAVVNPRhraPQ.RP...HNPHRNLHEEAE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      45.37|      13|      30|     242|     254|       5
---------------------------------------------------------------------------
  242-  254 (24.79/17.98)	FTRARNVMKY.EPP
  274-  287 (20.58/13.47)	FSSTSDNMEFgNPP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      46.73|      12|      20|     289|     300|       7
---------------------------------------------------------------------------
  289-  300 (22.45/12.92)	LSSCSDFDNRSM
  312-  323 (24.28/14.54)	FSFCSEESDGCM
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP02900 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) VRSASAPPPPRPQSQPLLQPQPNNNIPDPTESPSSARAVVNPRHRAPQRPHNPHRNLHEEAEIKSPFTRARNVMKYEPPTPESDISFVSSGKPSSDTMFSSTSDNMEFGNPPRLSSCSDFDN
176
297










Molecular Recognition Features






MoRF SequenceStartStop




NANANA