<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP02885

Description Uncharacterized protein
SequenceMAPRLSPDDNLPANSTAVAIDKDKNSPHAVRWAIDHLVISNPIIVLIHVRHRNQGEPESDHDINQLFVPFRGYCARKGIQAREVVLEDVDISKALIDYVSRNLINSIVLGAATRGAISSYLSYRKFKSDIPTTLIKTAPDFCSVYVISKGKILTVRTAQRPVSNTAAPPKAPVGMPPQIPSDQSEDDGYRGQYTRGVPGNAGSERLSFDNSSRAPIRDRHRSSPGNMSLDIDVGRGPSSSRQDSLSSDIDFPAKISLGSVDISGQNLDFSSSNSESSSQSARDIEDEMRRLKLELKQTMDMYSSACKEALTAKKTANELHQWKMEESRRFEEARQAGEAALAMAEMEKAKCRAAIEAAEAAQKLAEMEAYRRRQAESKAKKESDEKNRALNALATNDVRYRKYSIVEIEEATENFSASNKIGEGGYGPVYKGKLDHTPVAIKILRPDAAQGKKQFQQEVEVLCSIRHPHMVLLLGACPEYGCLVYEYMHNGSLEDRLFRKGNTHPLSWRRRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSLGIMLLQIITAKPPMGLAHHVGRAIEKGTLADLLDPAVPNWPMEEALSFAQLALQCAELRKRDRPDLATVILPELNRLRDLGYNNNGSSSSGYSQGHGGSDQSQGFNTSGCSRGHSGSDGLRSPFSRSRVSSSSSQESLSKSANSELGSMLNLKLDRAE
Length762
PositionTail
OrganismGossypium raimondii (New World cotton)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Malvales> Malvaceae> Malvoideae> Gossypium.
Aromaticity0.06
Grand average of hydropathy-0.496
Instability index47.85
Isoelectric point8.33
Molecular weight83858.69
Publications
PubMed=23257886

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP02885
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      59.50|      20|      20|     213|     232|       1
---------------------------------------------------------------------------
  195-  220 (26.68/14.25)	RGVPGNagsERLSFDnssRAPIRDRH
  221-  242 (32.82/19.28)	RSSPGN...MSLDID.vgRGPSSSRQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      87.86|      20|      20|     335|     354|       2
---------------------------------------------------------------------------
  311-  333 (23.49/14.19)	TAKKTAneLHQWKMEESrRFEEA
  335-  354 (33.27/23.20)	QAGEAA..LAMAEMEKA.KCRAA
  356-  375 (31.10/21.21)	EAAEAA..QKLAEMEAY.RRRQA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     105.62|      25|     446|     270|     294|       3
---------------------------------------------------------------------------
  270-  294 (40.11/20.70)	SSSNSESSSQSARD...................IEDEMRRLKLE
  691-  734 (26.89/11.58)	SSSSGYSQGHGGSDqsqgfntsgcsrghsgsdgLRSPFSRSRVS
  735-  759 (38.62/19.67)	SSSSQESLSKSANS...................ELGSMLNLKLD
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP02885 with Med32 domain of Kingdom Viridiplantae
Unable to open file!