<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP02863

Description Uncharacterized protein
SequenceMAPPFSSDDNIPTNTTAVAIDKDKNSPHAVRWAIDHLVVSNPYIILIHVRHRNLGESESDYDINQLFIPFRGYCARKAIQLKEVVLDDADICKALMDYVNKNLINNLVIGGATRNGLSRKCKNDISASLIKSAPDFCSVYVISKGKILTMRTAQRPISNTATPPKAPSGMPPPIPSDQFEDDGSRAYYARGGSRNAGADRMSVDNTPKAPMRDRDRQRSSPGNLSFDIDSAMRAAQPSSSQDSLSSDSSFPNKRSHGSIDFSDQNLDFSVISGPSTGQLPQSSRDIEAEMRRLKLELKQTMDMYSTACKEALTAKQKANELHQWKMEEARKFEEARLAGEAALAMAEKEKAKCKAAIEAAEAAKRLAEMEAHRRRQAELKAKKEADEKNRALNALAHNDVRYRKYTIEEIEEATENFEAHNKIGEGGYGPVYKGKLDHTPVAIKVLRPDAAQGKKQFQQEVEVLSCMRHPNMVLLLGACPEYGCLVYEYMFNGSLEDRLFRRGNTPPLSWRRRFTIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSLGIMLLQIITAKPPMGIAHHVGRAIEKGTFADMLDPAVPNWPVEEALSFAQLALKCVELRKRDRPDLGTIIVPELNRLRDLGSSSDSHSHGCQGNSGGYSSDGNTGANGRSSRSMLSADSQESLTKTANSDP
Length737
PositionTail
OrganismGossypium raimondii (New World cotton)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Malvales> Malvaceae> Malvoideae> Gossypium.
Aromaticity0.06
Grand average of hydropathy-0.518
Instability index47.37
Isoelectric point8.11
Molecular weight81369.25
Publications
PubMed=23257886

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP02863
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     157.55|      40|      41|     202|     242|       1
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  157-  177 (26.74/10.40)	.ISNTatpPKAP...................SGMPPPI.PS...D
  202-  242 (70.51/43.28)	SVDNT...PKAPmRDRDRQRSSPGNLSFDIDSAMRAAQ.PSSSQD
  245-  285 (60.31/32.29)	SSDSS..fPNK..RSHGSIDFSDQNLDFSVISGPSTGQlPQSSRD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     190.46|      47|      49|     325|     372|       2
---------------------------------------------------------------------------
  287-  322 (51.31/34.55)	...EA...EMRRLKLELKQTM.DMYSTACKEALTAKQKANEL.....H
  325-  372 (69.55/54.39)	KMEEARKFEEARLAGEAALAMAEKEKAKCKAAIEAAEAAKRLaEMEAH
  375-  420 (69.59/49.57)	RQAELKAKKEADEKNRALNALAHNDVRYRKYTIEEIEEATE..NFEAH
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     147.62|      42|     116|     506|     547|       4
---------------------------------------------------------------------------
  506-  547 (72.58/44.33)	PPLSWRRRFTIAAEIATALLFLHQAKPEPLVHRDLKPANILL
  618-  659 (75.03/46.06)	PPMGIAHHVGRAIEKGTFADMLDPAVPNWPVEEALSFAQLAL
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP02863 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) FSDQNLDFSVISGPSTGQLPQSSRDIEAEMRRLKL
2) GSSSDSHSHGCQGNSGGYSSDGNTGANGRSSRSMLSADSQESLTKTANSDP
3) TAQRPISNTATPPKAPSGMPPPIPSDQFEDDGSRAYYARGGSRNAGADRMSVDNTPKAPMRDRDRQRSSPGNLSFDIDSAMRAAQPSSSQDSLSSDSSFPNKRSHGSI
261
687
152
295
737
259










Molecular Recognition Features






MoRF SequenceStartStop




1) RAYYA
185
189