<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP02736
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MEQDHTDDFASESFFDQNSLQQQIQHLDGTADLNAVSNVALPPNPAVIDKLSRRWYCGCLERIAWSRHGHLASISDDASTVYLECIRYDYESKSWGLHESHSLTTLFEDATSLAWSPNGGELAVVDVKGRIWIYHNSLLAINRLILARQGALDEGDEYSQPVGMTWLNQDRQERPRNVVTHAFKGDARWQHANARAKPLGPYWHRAVAIVHRNGLFTLCFQRGDGQYSKVTKQLSPPDDMLYSHASFAPTVEGKMLITLHSFKKVISVYFLSIDWNEVRATIEGLPVLTLESISSNVSSQPSGSPTLPDTYDPDSWLLSHLEVVRTSDVEKAVQIPPTILAISSGVNRTVNIPDSGFLVSSMIKRWLVTPVEQKLHPLFDALPSTGPGATAPKPTYTLQRQPDKEEQAITTIHHVDGVQALAVTTQENRIDFLSSDDLSPMSYSASVQETTSMSQSGFAFPYAQVLLTPAFSPNACVRADLTPDGKTQLVAMEYQLGQPQSLQPLDPNVDVALASLNLTFARACWSNATIDDILMCVSQSIPTELYPIVISTIYRTLFRDNDFVNERTEGSELEKFIHKTVVGRVLSYHASLASNCPQLLSIASTDRRHGCWSLSAQWAWLVNNIRQTATLLFMAMRDVQNIQLVMSQDLTDLLCSNLRWGLSLMRFIISTILEVGDRETNPEMFDEKDPGRAGDSLGDGSQGLVALLLNCHPSRIFLIAFVRAVRAYAKNTEPKSNHHLQVLQCIQQQTTGKGLSFQAMEALLEYRWSAVGDVDRDIAATAARQVEMMTTGVVHESYQGTIKVLLNTLFNSAQGLRAKMLIDRVKLFIDQVDLEYIFLNHDILGRRSSDEDPDKKEVIYDVHRKRPILKGVAEPNGSGQLMIRKCLRCGSYSEDVNVPPKEWPRQVAMLLMRCVCDGGWVLKPWDTVHK |
Length | 930 |
Position | Tail |
Organism | Fonsecaea multimorphosa CBS 102226 |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Eurotiomycetes>
Chaetothyriomycetidae> Chaetothyriales> Herpotrichiellaceae> Fonsecaea.
|
Aromaticity | 0.08 |
Grand average of hydropathy | -0.217 |
Instability index | 42.26 |
Isoelectric point | 5.76 |
Molecular weight | 103979.94 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP02736
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 200.41| 66| 291| 388| 575| 1
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301- 370 (103.68/24.32) PSGSPTL...PDTYDPDSWLLSHLEVVR....TS.....DVEKAVQIPPtiLAISSGVNRTVNIPDSGFLVSsmIKRWLVTP
392- 469 (96.72/81.77) PKPTYTLqrqPDKEEQAITTIHHVDGVQalavTTqenriDFLSSDDLSP..MSYSASVQETTSMSQSGFAFP..YAQVLLTP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 314.91| 93| 453| 76| 172| 5
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76- 172 (160.01/108.24) DDastvYLECIRYDYESKSWGLHESHSLTTLFEDATSLAWSPNGGELAVV...DVKGRIWIYHNSLLAINRLILARQGALDEGDEYSQPVGMTWL.NQDRQ
531- 627 (154.90/96.78) DD....ILMCVSQSIPTELYPIVISTIYRTLFRDNDFVNERTEGSELEKFihkTVVGRVLSYHASLASNCPQLLSIASTDRRHGCWSLSAQWAWLvNNIRQ
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 75.52| 22| 212| 471| 492| 6
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471- 492 (40.69/26.20) FSPNACVRA.DLTPDGKTQLVAM
685- 707 (34.83/21.33) FDEKDPGRAgDSLGDGSQGLVAL
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