<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP02713
Description |
Mediator of RNA polymerase II transcription subunit 5 |
Sequence | MTVSKWLTLTRQCLLRRISVQDFGNLLRNHDGEIDGKRLFGALVECRESFCQPGDPLVSLYIDYIATAGVIVISDALVILTKRWNATRSPATQGALACYNDTLQDLTMVIVSPKFKTGAAEARLALQISSRWLSTLARQASRGDSEPPGMELSSTIELLAFLMASMTATDAGLESLSIAKSLEQKEKYVAVDNLRTLVKQAFELCLPLYSTLSSQLMERINTVLKHINLLDDGSAQPGNAPAPASEIQALQFQVSIADSQLVASKAGTMLYLESLLFAGSTIDDGGTVHWLSARHQNDYQSMFIDVFTSSFSILKAQTITPGRTLCMQQCQIFIQNKLPALLSMISASSFNSFNTERAMTDSWHQVVSLLSSQDLILTGARLLHVCTLHHLLPAQTAVQLVGNEDTLKGLSKGLYAKDDLVAQVHANPTRGPKLVEELTRSDGSAGFISQAVVEIVHNYCQNKETQCLKDLANAILRRPTTINCIALFVRPDYFLGPLCGLLDEWRWDEIHGEAQPVYDDFGAIFLLILVSRERLGLSNSSLGIRKKDGFLARYLEHEHNEESLENLSEERKLHLGNWINALYLAEGLSDELFTNCSPHDFYLLIPTLLRQSMTAHQQGKLTHDSLQAGLDYLLEPFLLPSLISAMDWVAEVFQHERMVAGKVLEALIKPPGSLESRDIHHTILTLCAPRLKLRLKTIGAQDSDVDSILKTLDQCPDFSFVSERERETPNPGTLNIIQHCLANLITSTTALDIGEAPPFEDISALVSRAVEVHGPQTTLRAIVGVLLQLSDSHVFLYALDALTTAVCMAGNGLRDALRLQYHDLGNLLKSGETLAAEGVVRLYRQVETYTNLLAVPDMGLDSFNFSQQLTNMDTADPNLDAATAVSGGMDLQTDQGQADGIDQVLDEVAAMGNLDSNDADMSFDALYDLQGNDMDLNDLDLDMF |
Length | 944 |
Position | Tail |
Organism | Fonsecaea pedrosoi CBS 271.37 |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Eurotiomycetes>
Chaetothyriomycetidae> Chaetothyriales> Herpotrichiellaceae> Fonsecaea.
|
Aromaticity | 0.06 |
Grand average of hydropathy | -0.011 |
Instability index | 39.81 |
Isoelectric point | 4.86 |
Molecular weight | 103846.16 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364142
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP02713
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 103.77| 33| 43| 857| 892| 2
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857- 892 (54.28/40.46) DMGLDSFNfsqQLTNMDT..ADPNLDAATAVSG.GMDLQ
902- 937 (49.48/28.88) DQVLDEVA...AMGNLDSndADMSFDALYDLQGnDMDLN
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 39.26| 13| 37| 296| 311| 6
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296- 311 (20.28/21.45) QNDYQ...SMfidVFTSSF
335- 350 (18.98/10.15) QNKLPallSM...ISASSF
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 129.74| 40| 44| 712| 751| 8
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712- 751 (71.36/52.56) LDQCPDFSFVS...ERERETPNP.GTLNIIQHCLANLITSTTAL
753- 796 (58.38/41.52) IGEAPPFEDISalvSRAVEVHGPqTTLRAIVGVLLQLSDSHVFL
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