<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP02618
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MESLNSLKTNPLEQPDDFASEAFFNQNTLEQIQQLDTSTTLNAAANVVLPTKATILDQLQRRWFCGFSERVAWSRLGHVASISEDGSSVRVECLHYNYNSKSWGLEEKVVLPTLFEDAVGLLFSGHGQDLAVVDAKGRLFIYQCSHIAVNRFVLAKSGDLDEVNDASQVIGIAWLNQDRQDRARNIVTHATKNDTRWVHTNVRAKPLGPFFPHGLVMVHHSGTVAFWYSRNDGQYIKVTQNLNIINDTLYSHASLSLSANHRMMMALHSSQGEISVCFMSIAWPASTSNETDLPTLSFSFIPSQVQAFPVGSAAIPDLYDPNSWRLSHLELSQSPEVENQPSGPVAVVAVFTGINKAHSITDPGALTGSMIRKWFLTPVQRSLHPLFESLPSKGPAKSEPTSVLTLHAQSEKIEQVIVTIHHVDGLKAYVITTTENRTDFLSSEDFSPVSFAASVAETTSMAQSGFTYPFADMNCPSFSVNACVRADVGLDDKTRIAALEYQIQGPVQQPLDLNLDAAVASLNLAFARACWSNASIDDVIMCAQHSLPHDVLPSVVVGMYRTLFRDTEFINEKTPNSELERIFHKQVMGRVMAYHAMLVAHCPQLPSIASTDGRVGSWSLSAQWAWVASNIRHTATLLFMNLRDVAHATATMSQDYSDMLCLNIRWGLAVIRWIVSTILEVSDRETNPEIFNGKSGSLGDINGDGTQGLVALLLNIHCSRVFLVAFIRAVRAYAKSAEPKTRHQLQVLQTIQAHTTGKGITFPAIEAMLEYRWTAQGDVDGDIAATTMRQLEMMATGVVPESYQGTIKILLTKLFNSPAGLRAKNLIDRLKLFTDHIDLDYIFLNRDVLGKSQDDARQGRVIYDVHRKRPIPNGVMEPGDPQELVVRHCLRCGSFSADIVVPPPDWASKGVASLLAKCICDGNWVIVPWKQYSEG |
Length | 935 |
Position | Tail |
Organism | Exophiala spinifera |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Eurotiomycetes>
Chaetothyriomycetidae> Chaetothyriales> Herpotrichiellaceae> Exophiala.
|
Aromaticity | 0.08 |
Grand average of hydropathy | -0.082 |
Instability index | 39.53 |
Isoelectric point | 5.99 |
Molecular weight | 103358.35 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP02618
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 66.61| 21| 21| 480| 500| 1
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480- 500 (33.00/20.11) VNACVRADVGLDDKTRIAALE
503- 523 (33.62/20.62) IQGPVQQPLDLNLDAAVASLN
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 61.17| 18| 110| 128| 174| 2
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146- 168 (27.05/67.29) HIAVNRFVLAKSGDldevnDASQ
841- 858 (34.12/ 6.42) YIFLNRDVLGKSQD.....DARQ
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