Description | Mediator of RNA polymerase II transcription subunit 17 |
Sequence | MAENGATSFPVSIRPRGDRPDGDVENLVAKIRQINQQRDGFRKVTEEQLLLEMSEGKTGSPEASEAEEEDESDEEKKGTVEFVFQKRAQMHRSLHQSRENSLWALDTFSLTASSILKQSFQTASPAMRESIKEGSFSYTRRQAQPSTNPERERQKNQLWAGSFMTNNTESADTLLAAATRLEGLVKAETEYWRQLLSLTSKGWPVYKPGPHAPMHVRFVASEASPDFKSQGVAQLVPDEEGTIQLGSSVGREPRTLRLRRSRRGEVVASSVTASLLSLADLGSSLEDRVRREQSSLFEEELFQELAMESRILRPLGVKLRDKVLHLPVTSAQGEAEEYLVDLISIDEASEAVAASAPSEEKDVLDAQSVLLRLLLCHVYQLRLQRRSQIPPPLSDAPRKAPPSSILRTFLALNQHYAVCVPLEGYLAHLQKLLTVAGLPFSRDAIRLPGLHELLENTAEVLDEKKKREQAGHESLLHSLLEQISQPQRTTARLRLAGLARAGASTEHVVSIHVRTDLSAPIYGSEFVLELPAAMARLMYGRESHDKTVRFADLAEVRSFVNQLMSLHIVFHELVPRAGKGWVGNADTAIISKAVDGKDQQSKLAVGVRVENEQVEMRRRWFGGRADQDREVWSLTSTRAKSLPAVFEAWARQS |
Length | 653 |
Position | Head |
Organism | Verruconis gallopava |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Dothideomycetes> Pleosporomycetidae> Venturiales> Sympoventuriaceae> Verruconis. |
Aromaticity | 0.06 |
Grand average of hydropathy | -0.447 |
Instability index | 55.72 |
Isoelectric point | 6.30 |
Molecular weight | 72851.47 |
Publications |
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364140 |
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP02592 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 171.41| 53| 53| 494| 546| 1 --------------------------------------------------------------------------- 494- 546 (87.34/60.81) RLAGLARAGASTEHVVSIHVRTDLSAPIYGSEFVLELPAA.MARLMYGRESHDK 549- 602 (84.07/58.26) RFADLAEVRSFVNQLMSLHIVFHELVPRAGKGWVGNADTAiISKAVDGKDQQSK --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 49.56| 15| 287| 62| 76| 4 --------------------------------------------------------------------------- 62- 76 (25.05/15.15) EASEAEEEDESDEEK 347- 361 (24.51/14.67) EASEAVAASAPSEEK --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) FRKVTEEQLLLEM 2) VENLVAKIRQIN | 41 24 | 53 35 |
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Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab