Description | Uncharacterized protein |
Sequence | MTSISPAEPRPPSLRRPTDSKRPALGRASSHVFSPIDRKPPALQRETVETGEDRPTKRRKIEAEPNSNQVANNHNISLPAKAPDSHVDTKAVYWRWAKPSAIRAAGAGSKKKQEEENSSEDDAPELPPRPWTTTRAAKVADKPTPTHRSRVDIPVPNTPDSIQVPSSAPQFVPRRPVGFFPWTGKHPEDILNDNNVKNGYFDKPPNPTEKELNTARVPLYNAFKHKSGVDSLSTLFSLVLNQKSKHGLISSVSTFKPPPRVTLTEAKRKSWIADLANADVPLRRLSRTIPQGIKGQTLLEQCLQSSVPLSRAIWFAKCVCANEIRTLKRKGTAPAVAVGAENKWLREWTLNVEQFLETYLEHANPPDWKSNIQYALRLITRLYLENLLDRGHYLDWILRSFTVADVGHTPLWLMVIHIYKQDLSHYRRRGARLAKALIDKYRSIDKLPDQTITPLRQRLRAAIRELLFARPAIFLMPDRWPESVHVVRTCLDTTIGPEGQILEELNRINERAMGFNKAEFLSVRAPDEAIIETLDAARVPYNFALLEEELAGTCSDFDLLLRSCLEWSCTRFRQSNTRLYLVTRLVNRWRRGGRDIDTPILNFLSAFRAGKTTADTQALRHLIAQFSRSDCFPVSKYLQWLMVRGLPEKGTVRIDTGPIFGRTAGVEPPRQPESVQFLLDLSLHRAEDHVINLRNSVLERAGFDPNSEEAIFEQCVRFLEQKLADSSFITKPEPPTLAEPSFASLPWTLRTRISMWLRSRALEAAKLAQSTPMLPGSKILNEEQFFVIRHVLECMEDAAVLADVVGILSVSQRDDLVASLVATTHFHATSFSAIGALEVLQKRMCQVYMNWRPTKPTMPLLTSTLLDLCTAFPVKAPAIRLLQQDLVRGDRGRAVAACSPYSDGIAESLQQAGATFVEDFEAILQSETNMNEQTMNGLFSVLVDRIEKQQKFGDDAHTLHSFCQLLSRLRLCRKTQGDALIQKWMLQLTPRLDLKSGPLLLRILIATGCITFATIFEATIGSKSGPRKNLAVSSLLYQILAPANSTSLDWATYQTRTRWYEYSQREPSTALEILCQAGLQGVSPPFDSLLLVVLVNNWTLDSSSLPDSAKKWLVKSLSLPLKCSDGDLNVAGLQDLLESINVFSHRFVQLRFRLMSPASVEKASGPDQPDLIEVLSQSLKQALQKQSSTHGQEQRFSRLFQIVGPNVASQVRHNVENEFLDALPKLPLGKVTSPPSAVFPSDVQQLSLITEQAFQVCRQDISPSPGFMSHLIDRLSQHLKYLGSVQMTPGTPAPSVTTAPPTVSASSGSSTNMNHSQMMSITSSPNPSTLDMGGGSCPPVGLSYLRYMLQMVCLQRPTLISSGSGGPNAKQAQNEQFQLLVRLASIATHPAMALASGHHGNQEEQIKAKEVVEFACDVIATIIDSVNDEVKMMCAKVLKDKLQDPRLAYLFGSINMMGSLQVQDMGRGLQMVKEGKGIIGEWKPRMWEVLDNGSGKESETSLGLGLFRARYG |
Length | 1512 |
Position | Kinase |
Organism | Cladophialophora immunda |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Eurotiomycetes> Chaetothyriomycetidae> Chaetothyriales> Herpotrichiellaceae> Cladophialophora. |
Aromaticity | 0.07 |
Grand average of hydropathy | -0.285 |
Instability index | 52.50 |
Isoelectric point | 9.05 |
Molecular weight | 168534.34 |
Publications |
Annotated function |
Component of the SRB8-11 complex. The SRB8-11 complex is a
regulatory module of the Mediator complex which is itself involved in
regulation of basal and activated RNA polymerase II-dependent
transcription. The SRB8-11 complex may be involved in the
transcriptional repression of a subset of genes regulated by Mediator.
It may inhibit the association of the Mediator complex with RNA
polymerase II to form the holoenzyme complex.
Component of the srb8-11 complex. The srb8-11 complex is a
regulatory module of the Mediator complex which is itself involved in
regulation of basal and activated RNA polymerase II-dependent
transcription. The srb8-11 complex may be involved in the
transcriptional repression of a subset of genes regulated by Mediator.
It may inhibit the association of the Mediator complex with RNA
polymerase II to form the holoenzyme complex.
ECO:0000256 ARBA:ARBA00002895 ECO:0000256 ARBA:ARBA00003744 |
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP02570 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 1478.23| 500| 564| 181| 744| 1 --------------------------------------------------------------------------- 181- 730 (753.70/625.88) PWTGKHPEDI.LNDNNVKNGYFDK..PPNPTEKELNTARvplYNAFKH.KSGVDSLSTLFSLV..LNQKSKHGLISS.VST..FKPP..PRVTLTEAKRKSwiadLANADVPLRRLSRTIPqgIKGQTLLEQClqSSVPL.SRAIwfaKCVCANEIRTLKRKGTA..PAVAVGAENKWLREWTLNVEQFlETYLE.HANPPDWKSNIQYALrLITRL.YLENLLDRGHYLD...WILRSFTV..ADVGHTPL..WLMVIhIYKQDLshyrRRGARLAKALI.DKYRSIDKLPDQTI.TPLRQRLRAAIRELLFArpaiFLMPdrwpesvhVVRTCLD.TTIGPEGQILEELNRINERAMG.FNKAEFLSVRAPDEAII.......ETLDAARVPYNFA..LLEE.ELAGTCSDFDL.......LLRSCLEWScTRFRQsnTRLYLVTRlVNRWRRGGRDiDTPILNFLSafRAGKTTADTQALRHLIAQ.FSRsdCFPVSKYLQWLMVRGLPEKGTvrIDTGPIFGRTAGVEPPRQ..PESVQfllDLSLHRAEDHVInLRNSVLERAGF.....DPNSEEAIFEQCVRFLEQKLADSsfIT 746- 1297 (724.53/489.65) PWTLRTRISMwLRSRALEAAKLAQstPMLPGSKILNEEQ...FFVIRHvLECMEDAAVLADVVgiLSVSQRDDLVASlVATthFHATsfSAIGALEVLQKR....MCQVYMNWRPTKPTMP..LLTSTLLDLC..TAFPVkAPAI...RLLQQDLVRGDRGRAVAacSPYSDGIAESLQQAGATFVEDF.EAILQsETNMNEQTMNGLFSV.LVDRIeKQQKFGDDAHTLHsfcQLLSRLRLcrKTQGDALIqkWMLQL.TPRLDL....KSGPLLLRILIaTGCITFATIFEATIgSKSGPRKNLAVSSLLYQ....ILAP........ANSTSLDwATYQTRTRWYEYSQREPSTALEiLCQAGLQGVSPPFDSLLlvvlvnnWTLDSSSLPDSAKkwLVKSlSLPLKCSDGDLnvaglqdLLESINVFS.HRFVQ..LRFRLMSP.ASVEKASGPD.QPDLIEVLS..QSLKQALQKQSSTHGQEQrFSR..LFQIVGPNVASQVRHNVENEF..LDALPKLPLGKVTSPPSAvfPSDVQ...QLSLITEQAFQV.CRQDISPSPGFmshliDRLSQHLKYLGSVQMTPGTPAPS..VT --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 146.65| 41| 42| 63| 103| 2 --------------------------------------------------------------------------- 28- 59 (43.16/24.78) ........ASSH.VFSPIDRKPPA.LQRETVETGEDRPTKRR 63- 103 (70.13/45.89) AEPNSNQVANNH.NISLPAKAPDSHVDTKAVYWRWAKPSAIR 107- 136 (33.36/17.11) AGSKKKQEEENSsEDDAPELPPRPWTTTRA............ --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 64.41| 18| 29| 1318| 1335| 3 --------------------------------------------------------------------------- 1318- 1335 (32.65/22.03) MMSITSSPNPSTLDMGGG 1348- 1365 (31.76/21.18) MLQMVCLQRPTLISSGSG --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) DSKRPALGRASSHVFSPIDRK 2) HVDTKAVYWRWAKPSAIR | 19 86 | 39 103 |
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Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab