<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP02494

Description Uncharacterized protein
SequenceMSLTRSPEDIEKDIANIEHALLTANIIQAEQKGPNFVQSFSDRLKCVKRDLNTLSAEGENLKGALEHAQIAANENKFNWELIKSETEKEAAEEEIRYREEEANSGKAKELGSVVKASADHAYKELSSVVLERKSTLTQPESLFFTKYIQEWLAENKTNNADIFVGFIKEEQQTLSGSTCRIQICIRKALVADLELEYERGSDTLMIHQYDIKSTKEEKQSWQDSQYLVFQKMNLLATTAFEDMLVFFAREALHNILNWFASYHDLFMLPCQRCHKLLQFDSPQYRYLPPMVRIWAKKQPIQQNEDAPMVQSTGVPYHMRCYIEYRNNHAIPIMPHKRAKASVRKARQQEKDMPVAKDDATSEDTPKGFSRLLRFKEMAIKRQVEKKEAKKNVEALANKKNIHIQPGERMKDFVQRVESEFQSEMITVQKKSKPVSDRKKRNQETRKQKKVAKLQKELDLYGGRDFDDLKDNVKFGEVADAPPVLNKIPKARGRGKEVNRARRNMLEQKNKKAIASSTTKAPNTEEKKETGYESEEDENMKALKASHKRKIQNMSAAARIQLDNEREKVIEAYRAKKAKRMNDSGFNYMRFCSLALIIAVVLASVHAAPAVNVPSNMAVDPKEFEASQVTAWNLRKIFRLSIGSRKIKVLCGKSIGKTSEVQDAADRFATTPEEALEDERFSKAAYPLEAGAHKITIKVSDIINENDDDDDEDDEDDDDQHGGKDKDDKDNDDEKDEDCEDDKHGGKGKGKGGKRKPIWIVHTVTANEPPAAIVAMS
Length776
PositionTail
OrganismMucor ambiguus
KingdomFungi
LineageEukaryota> Fungi> Fungi incertae sedis> Mucoromycota> Mucoromycotina> Mucoromycetes> Mucorales> Mucorineae> Mucoraceae> Mucor.
Aromaticity0.06
Grand average of hydropathy-0.820
Instability index43.59
Isoelectric point7.57
Molecular weight88478.18
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP02494
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      74.50|      19|      20|     707|     725|       1
---------------------------------------------------------------------------
  707-  725 (39.80/21.38)	DDDDEDDED.DDDQHGGKDK
  729-  748 (34.70/17.78)	DNDDEKDEDcEDDKHGGKGK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      36.85|      12|      45|      17|      32|       2
---------------------------------------------------------------------------
   17-   32 (15.51/18.79)	IEHALLTANiiqaEQK
   65-   76 (21.33/12.89)	LEHAQIAAN....ENK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     128.38|      37|      44|     269|     307|       3
---------------------------------------------------------------------------
  269-  307 (67.67/40.34)	PCQ.RCHklLQFDSPQYRYLPPMVRIWAK.KQPIQQNEDAP
  315-  353 (60.71/31.23)	PYHmRCY..IEYRNNHAIPIMPHKRAKASvRKARQQEKDMP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      85.99|      29|      49|     616|     648|       5
---------------------------------------------------------------------------
  616-  648 (41.79/36.71)	MAVDPKE.FEASQVTawnlRKIFRLSIGSRKIKV
  667-  696 (44.20/27.43)	FATTPEEaLEDERFS....KAAYPLEAGAHKITI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      89.59|      31|      55|     381|     417|       6
---------------------------------------------------------------------------
  381-  414 (43.19/41.98)	RQVEKKEAKKnVEALanKKNIHIQPG...ERMKDFVQ
  440-  473 (46.39/24.96)	RNQETRKQKK.VAKL..QKELDLYGGrdfDDLKDNVK
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP02494 with Med27 domain of Kingdom Fungi


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) EVADAPPVLNKIPKARGRGKEVNRARRNMLEQKNKKAIASSTTKAPNTEEKKETGYESEEDENMKALKASHK
2) KKEAKKNVEALANKKNIHIQPGERMKDFVQR
3) SEMITVQKKSKPVSDRKKRNQETRKQKKVAKL
4) VSDIINENDDDDDEDDEDDDDQHGGKDKDDKDNDDEKDEDCEDDKHGGKGKGKGGKRKPIWIVHTVTANEPPAAIVAMS
476
385
422
698
547
415
453
776










Molecular Recognition Features






MoRF SequenceStartStop




1) DDQHGGKDKDDKDNDDEKDEDCEDDKHGGKGKGKGGKRKPIWIVHTVTANEPPAAIVAMS
2) ELDLY
717
456
776
460