<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP02491

Description Uncharacterized protein
SequenceMHSNNSSNHNYLSEHLPVFDNGNNKDILKHVESLRTRLGFARFKLRNGWEKNSLGDVECFWKQRQRQLIKEIPIPRFTQQDIIDKRSYIPASGARYAKSKKTKFQSRGQSQQKKHQGQHPTARSNCHGTTSFALQQQQQQQHQQQQQQQQQQQTYFFHHYDKDVWNDKRSIAYSPESTPCIRNHSISSFDVSFVPNDLNGEPSNVKNSLDYLSYAIAMTERGHSPTSSLRQDSDIMPNEPTLLEDDGEEDEDTDVNLRDDVSPDWTRTSQLRLSLSIPNQVIIKEGDNSATASPASATSAAAQAMLMFVKREQEQRDQPSNVRTVSSN
Length328
PositionTail
OrganismMucor ambiguus
KingdomFungi
LineageEukaryota> Fungi> Fungi incertae sedis> Mucoromycota> Mucoromycotina> Mucoromycetes> Mucorales> Mucorineae> Mucoraceae> Mucor.
Aromaticity0.07
Grand average of hydropathy-1.067
Instability index65.67
Isoelectric point7.21
Molecular weight37591.86
Publications









Function






Annotated function


GO - Cellular Component
cytoplasm	GO:0005737	IEA:UniProtKB-SubCell
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP02491
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      83.11|      24|      25|      94|     118|       1
---------------------------------------------------------------------------
   94-  118 (38.01/21.37)	ARYAKSKKTKFQSRgQSQQKKHQGQ
  122-  145 (45.09/21.65)	ARSNCHGTTSFALQ.QQQQQQHQQQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      45.03|      12|      25|      21|      32|       3
---------------------------------------------------------------------------
   21-   32 (21.91/12.17)	NGNNKDILKHVE
   47-   58 (23.13/13.15)	NGWEKNSLGDVE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      86.22|      28|     201|      61|      92|       4
---------------------------------------------------------------------------
   61-   92 (42.78/39.66)	WkQRQRQLIKEIPIPrftQQDII....DKRSYIPAS
  265-  296 (43.44/26.99)	W.TRTSQLRLSLSIP...NQVIIkegdNSATASPAS
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP02491 with Med15 domain of Kingdom Fungi
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