<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP02489

Description Uncharacterized protein
SequenceMVVVSRSIIWSPHQGQNQFLAGGTELKLYEWVPETHDSPGRARYISTIPDITLMMCADWSPDPNCSDLVAVGLTTGRTLLVRMQEHSLTDYPHSDGIDTPTQGTRATIYSSNSSSNLIRQQQIQQQQQQQQQQQQQQAHQQQKQYPSLGVKLSRSSNVVSFSKTHPHLLAAGLDKVRNDPCLLVWDVTRSIDSYCNTPTGSQTPTAAFSIRGHAHLESRSTITSQWRVDSRDTYEIDRPKYTDMAPISTPGSGSREQGPVRQYGSSEAISSCAWSEHANAPLLIAGMGNKYLRVYDVRADVSSSPLQFATKAVHGIAIDPFCSYRLASYTEEGIIKLWDIRKNNDAILTLNPENKINLSKIVFSPTQPGFLASLTKDASHIDLWDIQETCSLQSAVNSSVQKSTITASSSTAQLLQQQGPAAAAASTAAPTKLERSTSQTALQTLSTSHGDDDKLSIPVLWKSRKTRSSVKKFASFAFIPNAVDASKPVSHNILAIHTDGKFESVKVQEACQISWQPSGGMIMTGKKGLLSYHPAFLDSALDTSMQHLRIEQQEEEEATMGDAAVEDPDDMMHRIQNREQHTITINRDRALASELDKDISVVMRKRLLEGYSMDCTKNISIVAKDRKLRELWSWMKIADQISTKLSKIGNADYSFHGVYGIWTGSQGRVSKSSSPASTPRVGASPKLPRQTSNPLKLKENDTTSALADKLNDTSNHLPMVETAKSAQRNLALIACGFGFDVKGFERELIDLESRGEYDKAAGLALFHGASERAIKALAEQQRKLMSAILASYQAGGTSTNDTWKDICESLSNDMADRPYLRAIFAYIASNDWYRILDEPGLPLRERMAVALRVLSDDDMSIYLHRTLDKLVQEGDVEGVVVTGLTPIGVDLLEKALDRFGDVQTASLIMSYTVPKRFRDIRVEDWVENYRLLMDRWQLWHARAKFDIQRGKRMNSSEIAPPQVYVRCNFCAQSLGHSLVIQNARNREGKRMNVQTSNPGGRASGKQKSSVCSSCRKPLPRCALCLLHMGTPIDQLRQTIITNDTHKVDPAGFDLWFTWCQTCRHGGHAVHMFDWFQKHSTCPVSNCACQCQI
Length1092
PositionTail
OrganismMucor ambiguus
KingdomFungi
LineageEukaryota> Fungi> Fungi incertae sedis> Mucoromycota> Mucoromycotina> Mucoromycetes> Mucorales> Mucorineae> Mucoraceae> Mucor.
Aromaticity0.07
Grand average of hydropathy-0.440
Instability index40.33
Isoelectric point8.28
Molecular weight121402.85
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP02489
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      80.85|      26|     118|     143|     179|       1
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  143-  168 (44.08/45.69)	KQYPSL.GVKLSRSSNVVSFS.KTHPHL
  189-  216 (36.77/15.98)	RSIDSYcNTPTGSQTPTAAFSiRGHAHL
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     161.63|      54|     118|     337|     403|       2
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  337-  403 (71.10/86.39)	LWDIRKNNDAI.....LTLNPeNKINLSKivfsPTQPGFLAsLTKDaSHIDLWDIQETCSLqsavnsSVQKS
  460-  518 (90.54/64.22)	LWKSRKTRSSVkkfasFAFIP.NAVDASK....PVSHNILA.IHTD.GKFESVKVQEACQI......SWQPS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      78.76|      14|      47|      10|      23|       3
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   10-   23 (28.59/16.05)	WSPHQGQNQFLAG.G
   59-   72 (27.85/15.44)	WSPDPNCSDLVAV.G
  274-  288 (22.32/10.89)	WSEHANAPLLIAGmG
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      45.31|      16|      17|     587|     602|       4
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  587-  602 (26.64/18.75)	RDRALAS.ELD..KDISVV
  604-  622 (18.67/10.85)	RKRLLEGySMDctKNISIV
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     140.75|      45|     253|     410|     455|       5
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  410-  455 (69.32/43.87)	STAQLLQQQGPAAAAASTAAPtKLERSTSQT.ALQTLSTSHGDDDKL
  665-  710 (71.43/41.17)	SQGRVSKSSSPASTPRVGASP.KLPRQTSNPlKLKENDTTSALADKL
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      50.76|      14|      16|     898|     911|       7
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  898-  911 (24.39/19.91)	RFGDVQTASLIMSY
  916-  929 (26.37/22.25)	RFRDIRVEDWVENY
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP02489 with Med15 domain of Kingdom Fungi
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