<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP02465
Description |
Mediator of RNA polymerase II transcription subunit 17 |
Sequence | MTNNPPDQSSQAANHETKRIPLAIDPNFMKTTSSALPTDQSDDNDKSQNGTHQNATTGQSLVNNPYEMFGSMPLDQLIPVILQSRGIGSKFADLSERVLSEEIANDAEDMEHVKNLDEDVEMDSSDFPANADQEALKPQQIEGPLAREEEDQMTQEQFQQLKNSTVQSLNLSVNEASLALEFVSLLLSSVRPSAANASMSPFLKNAVPTASLNAEKIPYEKATESEIVDKKLTTRGWKLRSLEESRVLLKDTHKTLEASLRKEQNYWSKVSANTSKKDVIFKMKDQETGEKSLGLKYGYEDSGSSYKQERGIAILRYNANKDALEAVPAEKQQFESMNRGPFEKFMRVRIFTKIQEEDDYILSGETALDDLLLAADNSGAEQNIRRQISKLQFLIFEKELMYHLKKESETLISYGVTLENENKITVEFPTEKIEFEMMNLTDEVILNHQQDAPKTNDRKAALILVMLRMLLVVMYKKQIRKKLLMVAHSKAVHPFDNEALLLRPIMGKFRHENYLNLLQKVIKTYVLDVVANSVVTEIPSDYRKQNIPVRRETYDKHITKLDDEITLFDKILQLPRIDLKVELPGSGKIEFGLESSNYCNATTSVKLVDASNATIFDTRFSNFKELEDFLHFIVSEYVTEGKQE |
Length | 644 |
Position | Head |
Organism | Lachancea lanzarotensis |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Saccharomycotina> Saccharomycetes>
Saccharomycetales> Saccharomycetaceae> Lachancea.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.546 |
Instability index | 44.86 |
Isoelectric point | 5.15 |
Molecular weight | 73190.98 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364140
|
GO - Cellular Component | core mediator complex GO:0070847 IEA:EnsemblFungi
mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | activating transcription factor binding GO:0033613 IEA:EnsemblFungi
RNA polymerase II complex recruiting activity GO:0001139 IEA:EnsemblFungi
RNA polymerase II core promoter sequence-specific DNA binding GO:0000979 IEA:EnsemblFungi
transcription coregulator activity GO:0003712 IEA:InterPro
|
GO - Biological Process | positive regulation of transcription by RNA polymerase II GO:0045944 IEA:EnsemblFungi
|
Interaction
Repeat regions
Repeats |
>MDP02465
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 41.06| 12| 153| 426| 437| 1
---------------------------------------------------------------------------
426- 437 (23.21/14.62) VEFP.TEKIEFEM
581- 593 (17.85/ 9.67) VELPgSGKIEFGL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 93.36| 41| 185| 130| 187| 2
---------------------------------------------------------------------------
130- 141 (-2.01/10.44) .................................NADQEALKpQQI
156- 187 (33.09/15.33) EQFQQLKNST.VQSLNLSVNEASLALEfvSLLL............
343- 384 (62.27/25.42) EKFMRVRIFTkIQEEDDYILSGETALD..DLLLAADNSGAE.QNI
---------------------------------------------------------------------------
|