<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP02458

Description LALA0S09e06304g1_1
SequenceMSDSTALPSEQRHQNKLTKCFDDIMKTAAEMLVQQQMKSIQLSSDIAAGFTQSQHKLLGEKVHTFHSILDDLDLTLTTAKNCVDKFAAEAAARREKLLEEQRVQQIEQEKLKREQEDQKRLIEAQKASESTPFGQNDYPESTPTTFLNELSKSNLSGPNRNLKEITTASAGQNDANDNTNGTGGSSHNTSGGHDGYSTGLNDLNDLDLSMFGGIEQNDLGLGFDEVPMAANNNDKNLNNESGLNDSAPPRGNDGSNQMLGNDPSANNTDSYLTLNDFNDLGLDWNNSDAQNGLDMSEFNI
Length300
PositionTail
OrganismLachancea lanzarotensis
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Saccharomycotina> Saccharomycetes> Saccharomycetales> Saccharomycetaceae> Lachancea.
Aromaticity0.05
Grand average of hydropathy-0.885
Instability index44.28
Isoelectric point4.45
Molecular weight32807.19
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP02458
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     168.60|      52|      58|     147|     202|       1
---------------------------------------------------------------------------
  128-  161 (39.37/13.53)	........................SESTPFGQNDYpeSTPTTF.....LNELSKSNLSGPNRN
  162-  217 (82.99/48.35)	LKEITTAsAGQNDANDNtNGTGgsSHNTSGGHDGY..STGLND.....LNDLDLSMFGGIEQN
  223-  259 (46.23/18.00)	FDEVPMA.ANNNDKNLN.NESG..................LNDsapprGNDGSNQML......
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      48.99|      15|      37|      47|      61|       5
---------------------------------------------------------------------------
   47-   61 (25.74/18.88)	AAGFTQSQHKLLGEK
   87-  101 (23.26/16.43)	AAEAAARREKLLEEQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      69.10|      19|      19|     260|     278|       6
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  260-  278 (33.91/17.62)	GNDPSANNTDSYLTLNDFN
  281-  299 (35.19/18.53)	GLDWNNSDAQNGLDMSEFN
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP02458 with Med2 domain of Kingdom Fungi


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) QNDLGLGFDEVPMAANNNDKNLNNESGLNDSAPPRGNDGSNQMLGNDPSANNTDSYL
2) RREKLLEEQRVQQIEQEKLKREQEDQKRLIEAQKASESTPFGQNDYPESTPTTFLNELSKSNLSGPNRNLKEITTASAGQNDANDNTNGTGGSSHNTSGGHDGYSTGLNDLNDLDLSMF
216
93
272
211










Molecular Recognition Features






MoRF SequenceStartStop




1) LDMSEFNI
2) YLTLNDFNDLGLDWNN
293
271
300
286