<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP02456

Description LALA0S09e07272g1_1
SequenceMDSDWRSTLSNQERSKYITELAQILAQISRVNGGDRGNFNLEKLKKTAEQFEKSLYASSTSKDLYLDSIRKRIAAMDTARKKAIANVQQSMAKAASQSQNSRNNSTMQQQQHYQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQRSSQYPSSNNNINSQMFFNQQAQLRQQAAQQLRSGAAPNGPVPNAPVRPQLTPQQQQLINEMKGAEIPRELLQRIPNLPPGVNTWQKVTELAQQKRLGPKDLQIAKQVYQMHQQIVFKSKLQQTNTNNRGAQQARPPTQTPSMAQLPQNQRPMMSQTTIQQHSPQQRQSQLQQSQQQQQQQQQQQQQQQQQQQQQQQQQSHPQQPPLQQQMQMNQAQSQPMRMNQAQQQPAQEVPNVLNRLNQIFTPAEQKALYENGKKLIADLQRTNRLPSVLTPQQQAVYIKKYINQMALKKLQAARNQMNNANAAPQQQAAPPPMEAAPVPQMSQFSSNGASNNAPVPANIAQGRPYGGTSVSNTNNNFNDVGPVSNAQASGTPNSTPHVPTAAPQGPQQPRFSLPRPTEQDLMVLRRISAEIQKSHLRLSNITNQISQEQKQSIRNKLQLNRQLFTNVDSFIPTLYMITRNEENVRQLLQIRMLAREITEHASRGVFIVPPEVVDKVIFRYQKYYEFIKDQVLRRHQQIIAARQQQQQQQQQQQPQAQPQQQPQQQQLENQPLPVNPADPTFNQQRIQGSFQQIQQQMQMRQQQQQKSQPTAQVNNWSRPVSGNGMDADPNLPPQTAPENIRSGSAGMEFLNSPEFLNAKSSPQQTGLSPAKKQAQMRKKMAMKQVSTPVPAATISSDIPNLAIGGGISNSSRGNTPNMAAAVTTSLSPMVNKIASNNASPSPKSLAVGAQPNPAPVNFPYKEDEDNSKRMVIRKNEIISRFKRRQDILRYSPADLFLSSLGDCLGVSEDLIELLNPIPREVVEQVNGAGKKKTAKTSALWGKEQDYANVSIKDNKIMFAPNPALSFYKSNPFAIKLDDVFSVFKDVYGSSHISDFSFDVKKVELESGGLKRKAADLDSSPNISPASTTIMSDSKKIKLDSPEDLYFTVPGDDIKKEISKDVTAQDTTENNIWQWNSWEAAA
Length1307
PositionTail
OrganismLachancea lanzarotensis
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Saccharomycotina> Saccharomycetes> Saccharomycetales> Saccharomycetaceae> Lachancea.
Aromaticity0.04
Grand average of hydropathy-1.343
Instability index91.68
Isoelectric point9.90
Molecular weight150346.13
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP02456
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
            10|     528.50|      20|      20|     114|     133|       1
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  147-  166 (52.85/ 6.64)	QQQQQQQQQQQQQQQQQQQQ
  167-  186 (52.85/ 6.64)	QQQQQQQQQQQQQQQQQQQQ
  187-  206 (52.85/ 6.64)	QQQQQQQQQQQQQQQQQQQQ
  207-  226 (52.85/ 6.64)	QQQQQQQQQQQQQQQQQQQQ
  227-  246 (52.85/ 6.64)	QQQQQQQQQQQQQQQQQQQQ
  247-  266 (52.85/ 6.64)	QQQQQQQQQQQQQQQQQQQQ
  267-  286 (52.85/ 6.64)	QQQQQQQQQQQQQQQQQQQQ
  287-  306 (52.85/ 6.64)	QQQQQQQQQQQQQQQQQQQQ
  307-  326 (52.85/ 6.64)	QQQQQQQQQQQQQQQQQQQQ
  519-  538 (52.85/ 6.64)	QQQQQQQQQQQQQQQQQQQQ
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     384.06|      68|     115|     331|     398|       2
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  327-  394 (130.39/34.00)	QQQQ...................QQQQQQQQQ....................QQRSSQYPSSNN...................NINSQMF.......FN...Q.QAQ.LRQQAAQQLRSGA.A....PN.GPVPNAPV........R.P........QL.TP
  395-  505 (58.97/ 8.34)	QQQQ..............linemKGAEIPREL....................LQRIPNLPPGVNtwqkvtelaqqkrlgpkdlQIAKQVYqmhqqivFKsklQ.QTN.TNNRGAQQARPPTqT....PSmAQLPQNQ.........R.PmmsqttiqQH.SP
  506-  588 (73.02/13.39)	QQRQ...................SQLQQSQQQqqqqqqqqqqqqqqqqqqqqQQSHPQQPP.......................LQQQMQ.......MN...QaQSQpMRMNQAQQ......Q....PA.QEVPNVLN........RlN........QIfTP
  589-  667 (67.53/11.42)	AEQKalyengkkliadlqrtnrlPSVLTPQQQ....................AVYIKKYINQMA...................LKKLQAA.......RN...Q.MNN.ANAAPQQQ....A.A....P..PPMEAAPV..........P........QM...
  862-  917 (54.15/ 6.60)	.......................QQIIAARQQ....................QQ................................QQ..........Q...Q.QQQ.PQAQPQQQ....P.QqqqlEN.QPLPVNPAdptfnqqrI.Q........GS.FQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      71.15|      18|      20|     108|     127|       3
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  108-  127 (33.18/ 8.80)	QQQQhyQQQQQQQQQQQQQQ
  129-  146 (37.98/ 6.80)	QQQQ..QQQQQQQQQQQQQQ
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     209.57|      55|     106|    1049|    1108|       4
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  991- 1044 (30.74/14.04)	.TGLSPakkqaqMRKKMAMKQVStPVPaatissdiPNLAIGGGiSNSSRGNTP.........NM............
 1049- 1108 (92.71/70.06)	TTSLSP......MVNKIASNNAS.PSP........KSLAVGAQ.PNPAPVNFPYKedednSKRMVIRKNEIISRFK
 1159- 1210 (86.13/54.25)	TAKTSA......LWGK.EQDYAN.VSI........KDNKIMFA.PNPA.LSF.YK.....SNPFAIKLDDVFSVFK
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      34.46|      11|      19|     752|     763|       6
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  752-  763 (14.99/13.54)	RISAEiQKSHLR
  770-  780 (19.47/11.78)	QISQE.QKQSIR
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP02456 with Med15 domain of Kingdom Fungi
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