<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP02417
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MDHTLSNGVKALDIVPSGLEDSPTLEQLERELRTVYDGQIPLGELVSRMAQAIYAELTEHAETMPHMSDIQRKRTLAEWVVKTKKQVVKLYAVAKWSRDAAVVQKALESTSTRLWYCRLTVQQNLVAFLMEQNRQFDEAISLLHHAKDTLDGARARNHDLLTSLDVLTTGSYHRLPSVIKKAVVQPDPLTPEDIRRTVADIEDVMRYRLRMHELVPREMSRYHITDGRVYFVAPNLFETSVCLKGAKSDDGWFFSDVEFLFQVGGDVTGMQDFPRRPNHVLMRPIADEADLRLGYYLQPEPVVPEGTDLPKPPSPPRLPDGVVDAPLVRLFNFLQMMSLSYQLEILWFQAERMRNLGWAEYLKVEMSKDRKTLTLTYWLRKPPPSNLSRNNAASRIPLFGGTLTISIIPTQPAPPLPPAPSTSSIRPSQSQNFSSQTSISSLRPSQSQSVPSSQTQRREPELSRYRQPPKTRVLAELQERAKLNIASKEQDRRLGKPSDEPEGMVLHVDWQPQHAALGIKLQPGEALISPDELMINSNNLDVEALLRKIIWTHSRSILHSFYAELSAGQWSAVFGRPGEVVLDIDESASLASLRVNLCADEVVFVTLDPRTGRLAMRDSGDLAATGRALRHPQLAEAVNANPTMLPDLLMRMRNFTILDTVEQKANYLGLQIFRQRNFRPEDLQKFGHQMGLLYVQLANFPTHYLVLVITDQDFRYALVSANVLPEAMYPELIMEDIGWLDVRRIHGDEVIITPDAVLSGQVPHRVMDSAGPSKGMTRFRLETQVLRELYAYCCARVAYTKVERQLKNRSIPYIHVIPSLGAGTVPALTHIHSSLARAIPALCVQSSDILSGAPAAEAAMPNIRVIPLNWWADQKIQVITCVKLKYVQQPVGKRAGSGAVIRPSKRIIYDTREAIVTFLSEDVDKCVDEFLEEWARVSKMVVIAREIAQMSSKRKWTDVRLLSFDLQTVEFAYAQDYTVSITCTDQLSPTGGTYDLHFSRMTKDAGDVDEETADIDTVLAQYNPHEDVEPFMQSLLRSGPLSASLVRLVSMLRDTLPIVTELEYIRVSAARAGENVDTFAKTAGWFRVLYGDFRHALDFRLMSQARVAILDASNTLYPHDKTSPHSREDDLVLQPIPDFRAIVVDACKDVLSTMPRTKTAPIDIGVVCEPFAVRAVARALHERVSRKLKETKVKTEPV |
Length | 1198 |
Position | Tail |
Organism | Phlebiopsis gigantea 11061_1 CR5-6 |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Basidiomycota> Agaricomycotina> Agaricomycetes>
Polyporales> Phanerochaetaceae> Phlebiopsis.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.239 |
Instability index | 46.75 |
Isoelectric point | 6.58 |
Molecular weight | 134945.28 |
Publications | PubMed=25474575
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Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP02417
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 50.14| 15| 15| 423| 437| 1
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423- 437 (28.16/16.37) SSIRPSQSQNF.SSQT
440- 455 (21.97/10.99) SSLRPSQSQSVpSSQT
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 70.43| 20| 21| 636| 655| 2
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636- 655 (35.78/23.13) EAVNANPTMLPDLLMRMRNF
659- 678 (34.65/22.17) DTVEQKANYLGLQIFRQRNF
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 305.98| 106| 377| 511| 621| 3
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511- 621 (166.11/130.40) QP..QHAALGIKLQPGEALI.SPDELMIN..SNNLD..VEALLRKiiWTH.SR.SILHSFYAELSAG.QWSAVfgRPGEVVLDIDESASLASLRVNL.CADEVVFV..TLDPRTGRLAmRDSGD
889- 1007 (139.87/93.75) QPvgKRAGSGAVIRPSKRIIyDTREAIVTflSEDVDkcVDEFLEE..WARvSKmVVIAREIAQMSSKrKWTDV..RLLSFDLQTVEFAYAQDYTVSItCTDQLSPTggTYDLHFSRMT.KDAGD
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 114.92| 38| 377| 713| 808| 4
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748- 788 (62.90/117.13) DEVIITPDAVLSGQVPHR....VMDS...AGP.SKGMTRFrleTQVLRE
1009- 1054 (52.02/ 7.56) DEETADIDTVLAQYNPHEdvepFMQSllrSGPlSASLVRL...VSMLRD
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 188.27| 61| 104| 251| 316| 5
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251- 316 (98.80/74.28) GWFFSD.......VEFL.FQVGGD..VTGMQDFPRR..PNHVLMRPIADEADLrLGYYLQPePVVPegTDlPKPPSPP
346- 418 (89.47/50.70) LWFQAErmrnlgwAEYLkVEMSKDrkTLTLTYWLRKppPSNLSRNNAASRIPL.FGGTLTI.SIIP..TQ.PAPPLPP
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