<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP02341

Description Uncharacterized protein
SequenceMQELSQDDSSTPPIYQSKAQSWIRRLHTTADLGYAGLFPSHPGQEEGLLSVRAVKYGFTTESRVSAEAFSAKSVIEGFHSNEVFLKLEEMMNELFVRRSEALPAIPPATFRLPARVTLNETKRRSWFRDLANPDVPLHKLGKSVPHGAKGHDLLDLLHTNNVAIPRAVWFLRVFGANEVAGLRNKPSYNPKQYSIDWANVVTSYMKKQLHDIALPSPPRAGLNIKQTFKGVLTDIETRERWVSRFSYCLHLLRIFYAEGMVDKRTFLVWLIQQMSTCNLAQAGFVVRLADEYLADITASRALSHSFADSSLNKLQEVLSSGSAQSCLHNTAILLRTLLQRVCLTMSDAFVSPRMWAANSHLLYEILAADTPSHTSNQHIEQGKSAIKKELRDSLSTIEIRNKQLSFIEPSAQSSPQIGSSVSDVKLLNSISNKMDLQEIEFFTCALDDPRAFRAKLDVLFTWSITPLQYGDHRLFVAVALLDKWRSKQDERAHRRNLTSPHDFLQDQLFDWLDFSPAARAPENIDSVALLFENLIERDLFCYAQYLERLIARSEPGLSLMEAQGSHHRNFLRHIPLSNSNPTPVNQRRVLLYGVRARQVPEEINERQIRKEIRRALPTLFGAGDAVTDSLPLDITSTCNTFVTCPRFEKLRTLKQWLLPILQSYVTSQRADPNCSSSLQIYATSIELMALAKAFDCIMNLIFALLQCANSIDIAMASVDYLYRYEDIWRCMGTMGKLVVQLDATQQALKAKGHRSRLIFDVLKLDGGRYLSPAALDRINYDIVHFTLALRPVDSHQESVPHVLPEIFRLESDFDSDFPSRLANSLWIKYRTSPEWAMIVWNNVLTSLQRMVNGDLTEETQSKYALQYGRFLRHIDQHLPTGLDEEISQWFDDPLWNQMVHSGPELWSTISIVLIDLVANHALQITTILRGLVFPAWQQGGSATEETCSKNSLTEYIEAMNKLCWSLLLPRSAGNGALDILRVQNIESRQQVVYSESFFPLLIAEIPTLISIESNGHLPESLRSKTSQLRHHLCQKEAFRRAVYRNLEITRDAFEQPLVLLSSDGNYCGSSFVAGLKEVLCPDEDMEADQWLPSTNQFSNPWKLAATSIHLQLVLKELGRALCHPETKDHAIPNLDKVSRELFHRRITSEESHYIAEVARGADNAVTEKLITSGLRRIRDILLCPESSGDALTDCLSWANEVLCAIVHLMGPSCDSVQPTPSMDPSLHEILLSAVHEKMVLFMQAMSSEYEHDAVLPGVVLLLRLLQFTLGFRGTWTAKAKDDGVALSVLLFRLTLKFCAGCDAEVSRYPQLLDTLYYLLDEIPHDTKVAFNPTRYYPEFSEGDISTDIAPEHRKQLLALSTKLTPNASTSDLASSTRDSRGDFLHNVSVVNRPWEWVEYLGEPASADAMDTTKGLLKNSGSLSLELFDTKLTGDTIIPKATEGLDGIPESSVRIFEDGLSAESSFRRDWRETRVSIFDGPTAPGAGRKATAEQELDAGKVMAAISTHGPKPEKKVESTALGRQSPALASIGRITDSTLSELADSESASTSSSKTLPNTKRKADNETEAVEPAPKRSKVKGGKAKRR
Length1586
PositionKinase
OrganismAmanita muscaria Koide BX008
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Basidiomycota> Agaricomycotina> Agaricomycetes> Agaricomycetidae> Agaricales> Amanitaceae> Amanita.
Aromaticity0.08
Grand average of hydropathy-0.244
Instability index54.18
Isoelectric point6.19
Molecular weight177961.61
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
transcription coregulator activity	GO:0003712	IEA:InterPro

GO - Biological Process
regulation of transcription by RNA polymerase II	GO:0006357	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP02341
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     158.87|      49|     115|     101|     214|       1
---------------------------------------------------------------------------
  126-  181 (79.03/145.40)	WFRDlanpdvPL.HKLGKSVPH..GAKGHDLLDLLHTNNVAIPRAVWFLrVFGANEVAG
  889-  940 (79.84/26.91)	WFDD......PLwNQMVHSGPElwSTISIVLIDLVANHALQITTILRGL.VFPAWQQGG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     139.18|      42|     115|    1365|    1428|       2
---------------------------------------------------------------------------
  719-  760 (75.55/38.08)	DYLYRYEDI...WRCMGTMGKLVV..QLDATQQALKAKGHRSRLIFD
 1382- 1428 (63.63/43.78)	DFLHNVSVVnrpWEWVEYLGEPASadAMDTTKGLLKNSGSLSLELFD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      98.62|      24|     115|     101|     124|       4
---------------------------------------------------------------------------
  101-  124 (41.90/22.37)	ALPAIPPA......TFRLP.ARVTLNETKRR
  186-  208 (25.99/11.31)	..PSYNPK......QYSIDwANVVTSYMKKQ
  213-  240 (30.73/14.60)	ALPSPPRAglnikqTFK...GVLTDIETRER
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      43.07|      15|      18|     584|     600|       5
---------------------------------------------------------------------------
  584-  600 (17.64/21.16)	VNQRRVlLYGVRaRQVP
  603-  617 (25.43/17.18)	INERQI.RKEIR.RALP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      42.86|      12|      25|    1333|    1344|       6
---------------------------------------------------------------------------
 1333- 1344 (22.81/15.29)	TRYYPEFSEGDI
 1361- 1372 (20.05/12.40)	TKLTPNASTSDL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     121.51|      38|     160|     844|     883|       7
---------------------------------------------------------------------------
  844-  883 (62.12/47.00)	LTSLQRmvNGDLTEETQSK......YALQYGRFLRHIDQHLPTGLD
 1008- 1051 (59.39/38.24)	LISIES..NGHLPESLRSKtsqlrhHLCQKEAFRRAVYRNLEITRD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      35.51|      10|      18|    1114|    1123|       9
---------------------------------------------------------------------------
 1114- 1123 (18.16/12.19)	LKELGRALCH
 1134- 1143 (17.36/11.27)	LDKVSRELFH
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      54.06|      15|      18|    1457|    1471|      10
---------------------------------------------------------------------------
 1457- 1471 (27.45/18.47)	DGLSAESSFRRDWRE
 1478- 1492 (26.61/17.63)	DGPTAPGAGRKATAE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      42.40|      12|      17|     687|     698|      11
---------------------------------------------------------------------------
  687-  698 (21.42/12.65)	LMALAKAFDCIM
  704-  715 (20.98/12.25)	LLQCANSIDIAM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      53.23|      14|      17|    1269|    1282|      12
---------------------------------------------------------------------------
 1269- 1282 (26.53/14.99)	LGFRGTWTAKAKDD
 1289- 1302 (26.70/15.13)	LLFRLTLKFCAGCD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      37.02|      11|      17|    1233|    1243|      13
---------------------------------------------------------------------------
 1233- 1243 (19.63/11.80)	AVHEKMVLFMQ
 1253- 1263 (17.39/ 9.65)	AVLPGVVLLLR
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP02341 with Med12 domain of Kingdom Fungi
Unable to open file!