<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP02312

Description Uncharacterized protein
SequenceMNQQNPNLQASNGQPPPQTPQQQHQAQQHQQLQLQQQQHQQLQQQQQQLQPQINLGHPNDIPNANWRNEVSVPDRTRFVSQLSLALKHLSPTTSENETYNVASNFEAGLYQRCTSKNQYILAYAKKFHHIRDQINQSSNMGNNMNGMIQQPMSPLVGNINGQAPSPQIQQQQQQQQQQQQQQQQQQQQQPGQRNNFQSPLNMNQQPQPQHQPVGQNQMRPQQANYQQAMLQQGRPPQQSMQTPAQQAQAQAQAQMLAYQRSAAAAAMAASNAPQAMQQAQRPPQQQQQGGQLPLNMLQNMNAPNAALGISPQQFQMYLARQMALQQQQQQQQQQQQQQQQSQSSPHIQNHLLQQQQQQQQQLQSSPIQQQGYSAPGKPAINMGGLTQQQLMNMAVMGNGVGNVSGNGVFRPGQAQQFSQQQSDSNSAIGSPMLQNPVSASYPNPMGNPAALSASNTPISVPATLATSAQQQQQQQQQQQHQQQMQQMQQMQQIQQQQKLQQQQFASMRPPPPSQQASQQAQQMVNQELLMQRMQQQQQQQQQQNMNSSNGIRPPLSSAQPTPHFVQQLQRPMMPQQMQMPPNGMLKPLTLQQRNSAAGIVKQMDESVRQGRVRGPVIEDLSESDKMAIRDQISQMKSMYDKIDNLLPVFLAMTSNVEATRRLILMKYMFEDQLVALPQNKFFISLENLHKLREQFSGYFTWVRNAVGQQQQQQQQQQQQQQQQHQQQQIGLGLLPVHMQQQQQQGSPMVNYSQMMSQPGMMVQQGMMNQAQSMSQQSQAQAIAMLRQQQQQTLAQQQDQHSQDAPAPSSSAMVPSANSTENTPVMANSTAVTTPAAATPTTPSMGIKRGSIDLKLPPAKKQRGGSKSSQSPTANRKTQKAAADKDKPPTANATPPATTAPAASDTPASAPASSIAQQQPPPPNPEVTSISASNSPAMLSNTDINLSHPANPVFHGHPQPIPPQQQQQLQPGHGGMDMNHFSHSMMMAGGNNGGIPVKGGMPLSQHQAQSQAFYMAAVSNGIPPQVVNLLPPKALQFNWILQQAAQNKMTLMPNQQQQIQALLNDHIEAAKQQLAHQTSEQDSGSQPPHTPSAAAAATANTPVSLGHVQSPHVGSPQRHQMRQMQMQQHPQQGMPPPNSQIPGTPSSQQAANAMMVPSSMAFHPGMVPNAAADDVMSSLYFNGLSHKQDTTNADMYSLSQTHQQQPTSLPPSQQQQQQQQQQPLPPPPQQHQQQQQQQYDGGYSSALKEGYKDETFGTPDLSLLTKPTSVIKEEDALVESGDLQPSWFDSSTGGIDLGLDGFDWDNNDFVKLDDNNDSTAPITSTTTTTTTTTTAAATATVPASSNNNGQNNADGSSSQQDDKKLIDESGKLCAVSL
Length1376
PositionTail
OrganismParasitella parasitica
KingdomFungi
LineageEukaryota> Fungi> Fungi incertae sedis> Mucoromycota> Mucoromycotina> Mucoromycetes> Mucorales> Mucorineae> Mucoraceae> Parasitella.
Aromaticity0.04
Grand average of hydropathy-0.944
Instability index77.09
Isoelectric point8.24
Molecular weight151480.56
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
transcription coregulator activity	GO:0003712	IEA:InterPro

GO - Biological Process
regulation of transcription by RNA polymerase II	GO:0006357	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP02312
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             8|    1280.12|     153|     153|     293|     445|       1
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    2-  144 (137.80/15.79)	..........NQQNPNlqASN.G.QP..PPQTP............QQ...QHQAQQHQQLQLQQQQ.......HQQ..L.........................QQQQ..Q...QL..............Q..PQ..INLGHpndipNANWRNE.VSVPDRTRfvSQ..L.SLA.......lkhlsptTSENETYN.............VASN..FEAGLYQRcTSKN.QyilayA.....KKFHHI.R.DQINQ...SSNM.G....N.N.M
  145-  284 (172.47/22.08)	N.G....MIQQ...PM..SPLvGnIN..GQAPSPQIQ..Q.QQQQQQ...QQQQQQQQQQQQQPGQrnnfQSPLNMN.......Q.................QPQPQH..QpvgQN..............QMRP...QQANY.........QQA.MLQQGRPP..QQ..SMQTP..............AQQAQAQA.......................QAQM.LAYQ.R.....S.....AAAAAM.AaSNAPQAMQQAQR.P......P.Q
  293-  444 (275.43/40.78)	PLN....MLQNMNAPN..AAL.G.IS..PQQFQMYLA..R.QMALQQ...QQQQQQQQQQQQQQSQ....SSPHIQNHL....LQ.................QQQQQQ..Q...QL..............QSSPI..QQQGY.....SAPGKPA.INMGGLTQ..QQ..LMNMA..............VMGNGVGN.............VSGNGVFRPGQAQQ.FSQQ.Q.....S.....DSNSAI.G.SPMLQNPVSASY.P....N.P..
  445-  519 (98.25/ 8.61)	...........MGNP...AAL.S.ASntPISVPATLA..T.S...AQ...QQQQQQQQQQHQQQMQ.....Q..MQQ.......M.................QQIQQQ..Q...KL..............Q...............................Q..QQ..FASM..........................................RPPPPSQQ.ASQQ.............................................
  521-  668 (122.86/13.08)	.......................................Q.QMVNQEllmQRMQQQQQQQQQQNMN....SSNGIRPPL....SS.................AQPTPHfvQ...QL..............Q.RPM..MPQQM.....QMP..PN.GMLKPLTL..QQ..RNSAAgivkqmdesvrqgrVRGPVIED.............LSESD..KMAIRDQ.ISQM.K.....SmydkiDNLLPV.F.LAMTSN.VEATR.RlilmK.Y.M
  677-  825 (179.45/23.35)	PQNkffiSLENLH.........K.L...REQFSGYFTwvR.NAVGQQ...QQQQQQQQQQQQQQHQ....QQ.QIGLGL....LP.................VHMQQQ..Q...Q...............QGSPMvnYSQMM.....SQPG......M..MVQ..QG..MMNQA..............QSMSQQSQ.............AQAIAMLRQQQQQT.LAQQ.Q.dqhsQ.....DAPAPS.S.SAMV..PSANST.E....NtPvM
  830-  980 (140.21/16.23)	AV..........TTPA..AAT.P.TT..P...SMGIK..RgSIDLKL...PPAKKQRGGSKSSQSP....TANR.KTQK....AA.................ADKDKP..P...TA..............NATPP..ATTAP.....AASDTPAsAPASSIAQ..QQppPPNPE..............VTSISASNspamlsntdinlsHPANPVFH.GHPQP.IPPQ.Q.....Q.....QQ..........LQPGHGGMD.M....N.H.F
  981- 1159 (153.65/18.67)	SHS....M...MMAGG..NNG.G.I...P......VK..G.GMPLSQ...HQAQSQAFYMAAVSNG....IPPQVVNLLppkaLQfnwilqqaaqnkmtlmpNQQQQI..Q...ALlndhieaakqqlahQTSE...QDSGS.....QPPHTPS.AAAAATAN..TP..VSLGH..............VQSPHVGS.............PQRHQ.MRQMQMQQ.HPQQgM.....P.....PPNSQIpG.TPSSQQAANAMMvP....S.S.M
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      68.91|      16|      16|    1202|    1217|       2
---------------------------------------------------------------------------
 1202- 1217 (33.14/ 9.70)	QQQPTSLPPSQQQQQQ
 1219- 1234 (35.76/11.22)	QQQPLPPPPQQHQQQQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      42.15|      15|      21|    1246|    1266|       3
---------------------------------------------------------------------------
 1246- 1266 (16.70/27.44)	LKEgyKDETFGTPDLslltKP
 1270- 1284 (25.45/15.64)	IKE..EDALVESGDL....QP
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP02312 with Med15 domain of Kingdom Fungi
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