<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP02308

Description Uncharacterized protein
SequenceMTSPYSANSSSSPGYHSPNIPRYNQNTPLKKYSLQPPSGILPLSKSMPSLGFPGMFPQHLGQDEDILTESNVRHGFIDRPVVSNEHTCAHDIVYGKLQDDQRLLNELGSFMVDVLQRQSRAGCITGPSSFRPPNRTTLIDSKREQWMQDLAGGIVPLKRLASNVPHGFKGEKLLETLAAKQVPFLRATWYIKIVGLSEMSQRSASNAATSMGPQPVQWRIVVTNHLKKLLSELMPASNTPANAPSPHPAPGRVYKGYNGLNHHDNTPKPWASPEDRARFENRWSYGVRLARWQYFEGLLDQRTFLRWTLDTLGASGSFEIMWLVLTGIIQDYVDEYKRNRTLTKLLIETLIKSYSALTQFIRQSQPDTAALGVHHGLQRDIEHLLQSMFLSTPDMFVIPKLYHQYRYLFNSILGDESRQKPSKSLPDVCRVMKEYWTMIKARNEVFCGSLEENEMKSEHPAEIDSKAQSNEVSIPPAASPSGISEALYEERVVHVLDRIGRNVDSITGLLLDNDTWVDIKGHTAKTASKSIFGTTRLQPQALVKLISIMCRWATSESRYGDWKAYLVASILLSWREQDKSQGSKLLLQDALIRFLDDEACPKSNEAATLDTQTLDTTIEQDHLVKANAPVIYLFDVLIRLRLFSYQKYLLRLIARGDLEPKRRHVRKIQQCLHHLASFPLLNPAPPYLVNQRRVALYGTRSDSDSKEEVEALEKLKHLARLAVAGFDNNDTDCLFGADAKEMTQPVPTDSMHSYELALAEENKSDFIQLMDSTTRYSVLNFTNWMLNEVKRFVVKSIQIGEDNWRVMTSPGSCLLNARQFVTVIRIMEYAKDYLTITETALWTLEKSDDPVLYPYIIDCLRKYSNYWKLTNSGTRVASAVWAKLVQEGYQMDDLVRAQLKQDLQVKSKLRGRYSNSVSVKDELTQLAKEPATSSLQMVSESLSVPSQNATGWLGAILESAGQVLRMVAKEKHIAELAKAHQTQLSPALYDFHRIVRAFAKILKDVSNHTTLTGQADEVVIHWLCNNDIVALDMNDECSWVPFYVAILVAYNVISLSTVVKEFALPWFEQVSRDGQQHYGAEESKLVVSCQNLISLIRLLIIQSSNQPRAEEESTTVHWQLRVEDFYRLQVQRQSQLASSLDRIEPMFGLMERLVMIATNLPLSSSLLQDLVMLRADLLQITWFRQACLRDLNGVYQRFAAREAEAAMEKRMKKKMLNIVDELIGGNNLAGERQGAIVQDTTPDFVDKLHRVFLNVSQWNEAQCRVQVNLLLDNISLSDGHAQNPNNPHILGDDISMDMTPAEAVSSSNKDLQSFVLFFYNVVLVDGKDESDPIEAQRRFQFFKNLIHELREPVLLELLHHGARLLEGNPGQSFPENVLLMQTTDPGSQFDSAKFAYRSQAFLNITQHMLAENVWSDEKKIELVKTVFGQITRFKHGLCIYRVMQGANVCYSDAANALQLVKNNVDMAISLLVTEGLAETTGEEAAKDLKLWIQDIRHSLLIRLRLVVPFASLIWEHPKEDECDILDWIRVLVPLLGNPIVHGNGSQERFFEFVLDFVSLLIDEVPTKDLKKASLVLLGSMHTELTSVPAMFHSRVKRIMPFLTHNAYLANTKLASSMLGLPPTNDPQQQQQHLELCLEQSKPWEWLEDYVSEPPHDNDAPISLSLFNARKSKRVDSTYVRWFKFGFDEGVSSKRRRRLNEDASHISTIELDKKRDELVDENGFMFIMDDDSKMDTSGVPSSIAKKRKVEMEEGELP
Length1756
PositionKinase
OrganismParasitella parasitica
KingdomFungi
LineageEukaryota> Fungi> Fungi incertae sedis> Mucoromycota> Mucoromycotina> Mucoromycetes> Mucorales> Mucorineae> Mucoraceae> Parasitella.
Aromaticity0.08
Grand average of hydropathy-0.310
Instability index45.66
Isoelectric point6.20
Molecular weight199382.43
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
transcription coregulator activity	GO:0003712	IEA:InterPro

GO - Biological Process
regulation of transcription by RNA polymerase II	GO:0006357	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP02308
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     189.46|      64|     230|     845|     935|       1
---------------------------------------------------------------------------
  856-  929 (87.70/98.96)	IIDCLR....KYSNYWKLTNSGTRVAsavWaKLvqegyQMDDLVRAQLKQDLQVKSKLrGRYSNSVSVKDELTQLAKE
 1092- 1159 (101.76/54.01)	LISLIRlliiQSSNQPRAEEESTTVH...W.QL.....RVEDFYRLQVQRQSQLASSL.DRIEPMFGLMERLVMIATN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     356.11|     100|    1059|     438|     539|       5
---------------------------------------------------------------------------
  438-  495 (66.53/46.09)	........................................................MIK.ARNEVFCGSLEENEMKSEHPAEI...DSKAQ...S.NEVSIP....PAASPSGISEALYEERvvHV
  496-  539 (43.22/22.55)	LDRIGRNVDSITGLLLDNDTWVDIKG.HTAKTASKSIFGT..TRLQP...............................................................................
 1457- 1553 (130.67/87.62)	LQLVKNNVDMAISLLV.TEGLAETTG.EEAAKDLKLWIQD..IRHSL.........LIR.LRLVVPFASL.....IWEHPKED...ECDIL...DwIRVLVPllgnPIVHGNGSQERFFE....FV
 1554- 1669 (115.70/75.99)	LDFVSLLIDEVPTKDLKKASLVLLGSmHTELTSVPAMFHSrvKRIMPflthnaylaNTKlASSMLGLPPTNDPQQQQQH.LELcleQSKPWewlE.DYVSEP....PHDNDAPISLSLFNAR....
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      87.64|      28|     496|    1174|    1221|       6
---------------------------------------------------------------------------
  184-  211 (48.29/26.36)	FLRATWYIK..IVGLSEMSQR.SASNAATSM
 1177- 1207 (39.34/61.61)	LLQITWFRQacLRDLNGVYQRfAAREAEAAM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     103.67|      29|    1059|     239|     280|       7
---------------------------------------------------------------------------
    3-   37 (43.35/16.71)	SPYSANSSSSPGYHSPNiprYNQNTPlKKYSlqPP
  245-  273 (60.32/39.98)	SPHPAPGRVYKGYNGLN...HHDNTP.KPWA..SP
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP02308 with Med12 domain of Kingdom Fungi
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