Description | Mediator of RNA polymerase II transcription subunit 1.1 |
Sequence | MEEMLVECADNEQGDSLLNGEFDLEKIEEEIRMEKIRQAASKHSWDNFSLNLRKNLMEKRIVLDADDREDVQNALSDLRKHMPADEGGDLAAHLRHLADILQCDFQAHTGCYKLKSADLSIELGVEDAHVSSCTVSWFGERAVEANTLKKLIAENKWGTIHNTLSVMLRLLPPNLQREEKCICMRSLELMEKDLLNASMSSMELIEKDLMNLSSTSLPLVDKINAGMLALCQPRTESSPFTIHLLAEPSVFFNVQSGTFVNVNEQAISDGSFLPCAQLSIVTSPTPQLFSDTPLLSAHGEWRTVESGCRLPAAFCLRFSRPIIFCADSLKKLSSVAAVPLVVEGGLNIYEYLFNEDDAKNDILVSLPGCPTQRYVLDQSMLCFHDDGIVREVTFMHPRDVVVIVDTVRAQLAHNALFESLVRAHNPNASLSNAIEIRLTSASVYNFDLIFNFRRTAFIARVNVPPAKMSVSLECIATGGILPETHCASSILAKSWSLGVMMRGVLRRGGAGGMQTPSEEAVLEMKENSNNNVIADGNDDVKVSQCWLPVANTTQQHAKRCNFEFIVADEGTSGGTRSLLTLFKELDQVDELIPPPAQPPGSLTPSAPPRIGEMLAPRTSRIHSENTMTINALSDLDAICDMAANIDDGESNVSEHSGRSSIVERCSPSAVEAQRLRAQVPPQSPSSGNDRYRGAQMSSIPQLSPLEIARQRLAQQTPLSNAADVFEFDDPPRMAPTSAFATSPQFQFPGGVQGSYQFPAIQPARGSMSGGAPLVKRRGRGRKAGSMGDRTGDHATTLIDPNTGFITTTTSARRPRGTATTRRPRRPRKAAQLAASQTHTHQFAIDRPLLQRSFSDVHYSAQISTAATVSNRSETVSEVDGLEESSDEETDPPPPTRLTAPPPTTTTSTAASVPQVTPTPASSCSPAASTKPTTTGSVNSAASSIASSSGSTEANTPVGTSPSAATTAGHSAGATASYQTSKSRKSSLEAVVGKLHCKSSGSSATPASNPYAASDLYDDESEPVSKPQESPATKREGASTPLASASPGARASPSARATPTSSAEQPISDLKIMIKLKQQPTNRSSTPQYPSTISPPSRLTGQPPSSSRSREEKALLRQRQLKEKARMQEERSRKSTKRERKSDSSGSSKKAKLERPPIPVEQKASRVELPPQVPAFASLKNFKIPKRWRNINLLAVKQQVALDATVHSRASVHMPSTKQRLPAALLAEKVASYEADDEMTRQARFVVSSQCTYGGRTATELVLV |
Length | 1263 |
Position | Middle |
Organism | Toxocara canis (Canine roundworm) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Ecdysozoa> Nematoda> Chromadorea> Rhabditida> Spirurina> Ascaridomorpha> Ascaridoidea> Toxocaridae> Toxocara. |
Aromaticity | 0.05 |
Grand average of hydropathy | -0.405 |
Instability index | 53.94 |
Isoelectric point | 6.82 |
Molecular weight | 136707.59 |
Publications |
Annotated function |
|
GO - Cellular Component | |
GO - Biological Function | |
GO - Biological Process |
Binary Interactions |
Repeats | >MDP02236 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 5| 640.51| 124| 127| 918| 1041| 2 --------------------------------------------------------------------------- 527- 631 (84.90/39.26) ....................NSNNNVIA.......DGNDDVKVSQ...............CWLPVANTT................................QQHAKRcnfefIVADEGTSGGTRSLLTLFkeldqVDELippPAQPPG.SLTPSAPPRIGEMLAPRTSRIHSENT.MTiN...A.......... 639- 718 (106.01/51.10) .....CDMAA........NIDDGESNVS.....EHSG..RSSIVE...............RCSPSAVEA................................................Q...................RL...RAQ......VPPQSPSSGNDRYRG.AQMSSIPQ.LS.PleiARQRLAQQTPL 736- 898 (132.09/65.72) TSAFATSPQFQFPGGVQGSYQFPA..IQ.....PARGSMSGGAPLvkrrgrgrkagsmgdRTGDHATTLidpntgfittttsarrprgtattrrprrprkaAQLAAS.....QTHTHQFAIDR.PLLQRS.....FSDV...HYSAQISTAATVSNRSETVSEVDGLEESSDEET.DP.P...PPTRLT..... 918- 1041 (194.92/100.94) TPASSCSPAASTKPTTTGSVNSAASSIA.....SSSGSTEANTPV...............GTSPSAATT................................AGHSAG.....ATASYQTSKSRKSSLEAV.....VGKL...HCKSSGSSATPASNPYAASDLYDDESEPVSKPQ.ES.P...ATKREGASTPL 1045- 1155 (122.58/60.39) SPGARASPSARATP..TSSAEQPISDLKimiklKQQPTNRSSTP.................QYPSTISP................................PSRLTG.....QPPS..SSRSREE..KAL.....LRQR...QLKEKARMQEERSRKSTKRERKSDSSGSSKKAKlER.P.............. --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 54.85| 16| 16| 63| 78| 3 --------------------------------------------------------------------------- 63- 78 (26.14/16.68) LDADDREDVQNALSDL 82- 97 (28.71/19.10) MPADEGGDLAAHLRHL --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) EQPISDLKIMIKLKQQ 2) NFKIPKRWR | 1063 1180 | 1078 1188 |
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Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab