<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP02190
Description |
Mediator of RNA polymerase II transcription subunit 5 |
Sequence | MDSQPSAARAALQEAVKYWSDFVARCIVQRLDSNRFLDFVQLVHARHPLPPVLVADLFLRPQPSNRVSLDPRIPPYVRILAQLRYVDAPSILRVLYKYSALHAHDRPPLPLPSSLPENGGDGETMKKEEEEEEKGAAGGGGVMRQDKMVRWQESAWAEEVLFYHVIKTMFEGTAFTDAKTGLELVDITCKWMDLFVHASSELAADMLANKHDRQARDEMETVRAALVPLLLRLVDNHELLRIISKPFAKGGENVLASHGCITVQPPPLYIERLEIFRTQTLAQLDPIDEKKKAANAAMEELLDSTVGSDNFVIPEILISNSRAALYVYLNAALVARPVLDDSMLYAFLSNKYQENQQASAVDLIVASFDVLANAVFRNEGPRDAHLLRSFVVNKLPLLLCQLCHPEFSAASAEFCITEALSRVDTGIFPTASLMFDESRNNNPYMDSVREEFCAACALHGLIERDHVDRILGETSMSYDPSLERANRDRLVSDCLSDSGRIQNIISQLDRVDGNVGAVAHAIVELIRQLCNNKDTTSLKLLCLQLSQKPQSLDIILLFDKVTSVLEPVCTLLDNWNYEEDQGEYQPVYEEYGAILLLVFAFTYRYNLSPLDIGIQSADSHVAKIIAKSHMLRPLEDLNEQEAEHVAGWITGLFDNETGGLGDDLMSSCPPHEFYLLVAPIFQSIITAYTYGYINDESLKGGVEYLVDTFLLPSLVPAIRFFSISGEASTVLSAVKNLIAQPLEHALRTYQRQDPRNQDIEPLLRSLKENLPLSRRTGGPEHHEMVSWANNSNSGLSGAIRHTMQGLVQWSLQPGVNVMPTSYTHRQLITGLRIIGPSRLLRLIMEEIRQQSELGNASIVYDVAAALIAATDPTNEAPPGPNLLDTAGTMQATPPPQRPQGLREALKTAAEGCKRLQKHDQFLAEATVRLHRMLLVVPQPQAMLQTTDMPLDLGGDAMAAAAAAAAAVGADPMSVDGLDTTGLDTTGLDLGLGADMGLSGGGSDGDLFGGLDTSLDMFDGWDSMDMGVN |
Length | 1028 |
Position | Tail |
Organism | Beauveria bassiana D1-5 |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes>
Hypocreomycetidae> Hypocreales> Cordycipitaceae> Beauveria.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.110 |
Instability index | 44.06 |
Isoelectric point | 4.88 |
Molecular weight | 113229.66 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364142
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GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP02190
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 97.26| 29| 37| 945| 981| 1
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945- 979 (43.42/41.55) TTDMPLDLGGDaMAAAAAaaaavGADPMSVDGLDT
984- 1012 (53.83/28.47) TTGLDLGLGAD.MGLSGG.....GSDGDLFGGLDT
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 57.31| 16| 37| 405| 420| 2
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405- 420 (28.25/19.98) PEFSAASAEFCITEAL
443- 458 (29.06/20.77) PYMDSVREEFCAACAL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 58.12| 18| 23| 607| 625| 3
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607- 625 (27.92/22.81) LSPL.DIGIQSADsHVAKII
631- 649 (30.21/19.46) LRPLeDLNEQEAE.HVAGWI
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 54.61| 17| 38| 794| 810| 4
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794- 810 (31.92/21.06) GL.....SGAIRHTMQGLVQWS
830- 851 (22.69/12.89) GLriigpSRLLRLIMEEIRQQS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 45.44| 14| 38| 460| 473| 5
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460- 473 (24.16/14.73) GLIERDHVDRILGE
480- 493 (21.28/12.08) PSLERANRDRLVSD
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 191.97| 62| 284| 1| 66| 6
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1- 66 (98.44/94.35) MDSQPSAARAALQEAV..KYWSD.FVARCIVqrLDSNRFLDFVQLvHARHPLPPVLvADLFLRPQPSNR
287- 351 (93.53/72.40) IDEKKKAANAAMEELLdsTVGSDnFVIPEIL..ISNSRAALYVYL.NAALVARPVL.DDSMLYAFLSNK
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