Description | Mediator of RNA polymerase II transcription subunit 17 |
Sequence | MADSFTLPLRPIPEKRDRPDTLPVEIAQINNQWGSFREVNEDVLRNKIVEEEGKDGLDELDESDQDATDLDSTERLEQLYKRRAEITQFAMQAHMETMFALDFVSLLLSKQAPRQAETSMSAFLKQVAPLGSLNADVVNPPPKPESTTKDVSAVSRGWRIQNFNAAANKLLQAASRLETEVASETRYWNEVLAVKDKGWKVSRLPREKQALGVQYGFIEATPVFRDRGLASLSRAEDGALLLDEGLIPPNARYVRVRVMQDGRLSGSSKPTRSTFNDDGSIEDRILQARDTVYEEELFHELVREARAIASFGVTTRQNLIQIPASDDLEILLDLVDTDEDTSEPEHDISQQGTSLAEGLAHTIRILLAYAHRQNLRRRTLLPPPLTPKIRSVPEHHLIRPALAYIKHMSHVRWLQSLLNDLFGVLKSANLKPPAYTSKVFSAGRRRQDSPAPAVETLVGQFLTPLMSTFHGNILTPRGSFSIAIHTNLSSPPFGTAFDVSFNMPKYQDLESPGKMYHREEVEAAITHLLLLDVVFTVSSNSGSLKSERDKDKEKPNWDAIYPQHGELLIPSKSEKRKKMKIALSRHELSLEIYTVRCIDGTGRGNWEKPSHHSMPHTWKPSPIAGSPKQPSLMDYVFTQVSQS |
Length | 643 |
Position | Head |
Organism | Penicillium italicum (Blue mold) |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Eurotiomycetes> Eurotiomycetidae> Eurotiales> Aspergillaceae> Penicillium. |
Aromaticity | 0.07 |
Grand average of hydropathy | -0.490 |
Instability index | 51.88 |
Isoelectric point | 6.18 |
Molecular weight | 72284.99 |
Publications | PubMed=25338147 |
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364140 |
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP02170 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 41.49| 13| 34| 354| 368| 1 --------------------------------------------------------------------------- 354- 368 (16.92/18.65) SLAEglAHTIRILLA 391- 403 (24.57/17.72) SVPE..HHLIRPALA --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 102.22| 31| 111| 131| 173| 3 --------------------------------------------------------------------------- 131- 167 (46.51/45.13) GSLNADVVNPPPkpeSTTKDVSAvsrGWRIQNFNAAA 423- 453 (55.72/26.21) GVLKSANLKPPA...YTSKVFSA...GRRRQDSPAPA --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 66.23| 24| 27| 186| 211| 4 --------------------------------------------------------------------------- 186- 211 (38.34/28.47) RY.WNEVLAV.KDKGwkVSRLPR.EKQAL 214- 240 (27.89/13.68) QYgFIEATPVfRDRG..LASLSRaEDGAL --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 53.21| 17| 31| 82| 101| 9 --------------------------------------------------------------------------- 82- 101 (24.71/28.07) RRAEItqfAMQAHMETMFAL 114- 130 (28.50/20.87) RQAET...SMSAFLKQVAPL --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) FTLPLRPI 2) LMDYVFTQV | 5 632 | 12 640 |
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