<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP02155
Description |
Mediator of RNA polymerase II transcription subunit 5 |
Sequence | MFARSPVKENELLDLLLESRASSSVTWDPLLPLYVDGLCKVGRVKSSSALASLLKHSSILDVSGSGESEGEGPGSPSKSKKQKPSTLMTDIKVIQDVMVFISTGSIPKTVIEAADIYSATVDWILAVVSWHTRCMDPSQQTGGLMGSPDAVSLFESLGILLAALSGTSKGLEVLSSDYNQELKAKLGEALSSYLPLCIDVSLPLRHRLEELQKVFNLYPGQPSKALHGAAIDGVNVNALQFESSVMDGPVVNTRAGLYVYINSMVVGRPLVDDTILINYLTNRYQGHNDVLIEEIITAAFDVLSNGVYRNESGRTMLLFRSFLVNKLPAFFAAISAASMVPISMEMCISHALSRLDPNAFPSFSQMFSMQGSSVLSDARQEFLFACASHKLIQESSIEQLLGENPMQTLSGGGPYLKDDLVSQINNNHERAEQLIGEIESMEGNAGAIVGAVVDVMHNLCHQKETMTLKNICNSLSRRPQTLDVMLLFRTTKQVLQPLCTLLDSWKWDEDQGENQPVYDEFGSILLLVLAFKYRYDLSPSDMGISNNDSFLLKLVDRGACSQKLSDLSEKQNKDLGAWIGALFIAEGISEETMSSCSPHEFYMLVTTLFDQSLGACESGKLDFDTLKGGFECKNTVTRSLPTGYPANRDTDLLEPFLLPSLVVALTWLGNHIWESETDPTIPIKTLHSLVKPSSISGEAQAIHQTVLNITGCPLEEQLKNVRTRNQSRTDIKPILDALEPYISFRRVGSCRRSELDTWTSHSAGGLIASIRTTLQALVLWSANPGISMAPHAYTHRQVLAGIRMLGATRVLGAIIDEVKQQTEAGSGHVALDIATTMVCAPMTESFAVDQNNYHPVDTSKEALPRCAILTLRDALSLQHENVPKISESDPLRAEVVVRLARRVNMLMAPPSQVSNIDVSNIIQNMHLGVEGQEDRMDLEPSAADVARNTVSEDDPDNINQMLDKAAADAAAAGMDGDIGVGQDMGLDSGAGMDAIDDVLNAADMAVGNPEFLDLDMEGMF |
Length | 1020 |
Position | Tail |
Organism | Penicillium expansum (Blue mold rot fungus) |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Eurotiomycetes>
Eurotiomycetidae> Eurotiales> Aspergillaceae> Penicillium.
|
Aromaticity | 0.06 |
Grand average of hydropathy | -0.051 |
Instability index | 45.11 |
Isoelectric point | 4.80 |
Molecular weight | 110952.14 |
Publications | PubMed=25338147
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 ARBA:ARBA00003669
ECO:0000256 RuleBase:RU364142
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP02155
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 113.28| 26| 26| 962| 987| 2
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938- 959 (33.61/17.82) LEPSAADVARNTVSED....DPDNIN
962- 987 (42.24/24.24) LDKAAADAAAAGMDGDIGVGQDMGLD
990- 1013 (37.44/20.67) AGMDAIDDVLNA..ADMAVGNPEFLD
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 560.97| 184| 639| 28| 231| 4
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28- 231 (286.31/201.87) DP.LLPLYVDGLCKVG.RVKSSS........ALASLLKHSSIldvsgSGESEG......EGPGSP.......SKSKKQKPstlmTDIKVIQDVM.VFIS...TGSIPKTVIEAADIYSAtvDWILAVVSWHTRCMDPSQQTGGLMGSPDAVSLFESLGILlaALSGTSKGLEVLSSDYNQElkaklGEALSSYLPLCID...VSLPLRHRLEELQKvfNLYPGQPSK.ALHGAAI
654- 868 (274.67/155.84) EPfLLPSLVVALTWLGnHIWESEtdptipikTLHSLVKPSSI.....SGEAQAihqtvlNITGCPleeqlknVRTRNQSR....TDIKPILDALePYISfrrVGSCRRSELDTWTSHSA..GGLIASIRTTLQALVLWSANPGISMAPHAYTHRQVLAGI..RMLGATRVLGAIIDEVKQQ.....TEAGSGHVALDIAttmVCAPMTESFAVDQN..NYHPVDTSKeALPRCAI
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 66.49| 20| 26| 454| 475| 5
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454- 475 (31.95/29.27) DVMhnLCHQKETMTLKNICNSL
483- 502 (34.54/23.40) DVM..LLFRTTKQVLQPLCTLL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 56.37| 16| 25| 611| 626| 6
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611- 626 (27.87/16.51) QSLGACESGKLDFDTL
638- 653 (28.51/17.06) RSLPTGYPANRDTDLL
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