<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP02138
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MSTDKMPLLLDSGIGGGLPIVDDLFGDVNTLGLPSGGSGKQLQQRIQALKTRGCQQTIAWSKSGAIASITPDGEQLELRFLRAHPETGVWGLSEPTTCGVVKGTPTIPLVHLEWGLAVISELAVFDAVGRVTIVSFPTTLNHGVATRKWDNDPIEDLNAVVGCHWLSVAPGNQQKPYNVLYGPGKQQGNTFQYENTFVPSGGPHHPHAGKSALFSVTMGGTLKMFWTQNNSRIEESSLELESVSSSDGLLTHAAMASDKKYLNVAMLTASKKLRFAKLEIQWAGPGAVQEKSQLTAASRLNPSLVESHLASVDIKEAFIGIDGIATDLTQLHTLPSVIDQSGTNTSPPLILAIRAESGGAGFTIAQTIIDRWEAIEERQSLNSTFEQLGTRRNSISGDFQLPTVTRLKKLEPVIIDKVVVALHSIRFGKVLVLAMADGSVEYRDRTSFEQIYTTMDTDTVTDLRQVGWTFTDEGSCHQVAFSPTCSSKIQLGEDLRLRWSKLHYPLDGMGDSMQDNAYSHSIAAATIATASAVWYMANFDDLVAVMHPLAEKQKFIQDWVGELIRILKIQVDYVEELHHDSLMRNSQLQSCLSIMNNLGFKGEFAPRSFQSKFASVKLNIRNVVILISLANNTPVSMKEKMNPLDEPEVVLALAGCAKWSLDLLSWITESLFELMTNKNFTDLLTPQRFQEVTPFLYERNEISLHLVLSSCSRSFLTAICRRIAHLEDISSRAINFWRQSAQKEPGAAQRPQSVQLQQAYQKMQKVTSSGLIKVGEFEKLLTVLGADIRGMYHTMLPNVVKNSPNPPQGKAMEFAMKAAQIQLELHMLLAKAPAPTFVGVVRKFFAKELPAFRAQTDPASLFFYNFSLLSEEDDPKSLATRKERHVWVDLFNKTELRLGTNQVLWRRCVRCSAVMEDAAAERPGYRFVLSLQRKCSCGGTWALLAHDKLIP |
Length | 951 |
Position | Tail |
Organism | Torrubiella hemipterigena |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes>
Hypocreomycetidae> Hypocreales> Clavicipitaceae> Torrubiella.
|
Aromaticity | 0.08 |
Grand average of hydropathy | -0.127 |
Instability index | 39.58 |
Isoelectric point | 6.78 |
Molecular weight | 105159.34 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
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GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP02138
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 478.62| 155| 167| 587| 751| 1
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587- 751 (243.75/191.67) QLQSCLSIMNNLGFKGEFAPRSFQSKFASVKLNIRNV..VILISLANNTPvsmkekmNPLDEPEVVLALAGcAKWSLD...LLSWITESLFELMTNKNFTDLLTPQRFQEVTPFLYERNeISLhLVLSSCSRSFLTAICRRI.AHLEDISSRAIN....FWRQ....SAQKEPGAAQRP
755- 923 (234.86/157.42) QLQQAYQKMQKVTSSGLIKVGEFEKLLTVLGADIRGMyhTMLPNVVKNSP.......NPPQGKAMEFAMKA.AQIQLElhmLLAKAPAPTFVGVVRKFFAKELPAFRAQTDPASLFFYN.FSL.LSEEDDPKSLATRKERHVwVDLFNKTELRLGtnqvLWRRcvrcSAVMEDAAAERP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
4| 226.34| 53| 168| 25| 77| 3
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25- 75 (81.13/62.90) ................FGDVNTLGLPS....GGSGKQLQ.QRIQAL..KT.RGCQQTIAWSKSGAIASITPDGEQ
129- 174 (45.84/31.56) .................GRVTIVSFPTtlnhGVATRKWDnDPIEDL..NAvVGCH....W......LSVAPGNQQ
177- 239 (65.14/48.70) YN..vlygpgkqqgntFQYENTF.VPS....GGPHHPHA.GK.SALfsVT.MGGTLKMFWTQNN..SRIEESSLE
240- 288 (34.23/21.25) LEsvsssdgllthaamASDKKYLNVAM....LTASKKL...RFAKL..........EIQWAGPGAV.........
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 137.62| 43| 169| 330| 372| 4
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330- 372 (74.66/44.33) QLH.TLPSVIDQSGTNTSPPLILAIRAESGGAGFTIA...............QTIIDRW
501- 559 (62.96/36.36) KLHyPLDGMGDSMQDNAYSHSIAAATIATASAVWYMAnfddlvavmhplaekQKFIQDW
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