<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP02114
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MCDLRRPAAGGMMDLAYVCEWEKWSKSTHCPSVPLACAWSCRNLIAFTMDLRSDDQDLTRMIHILDTEHPWDLHSIPSEHREAITCLEWDQSGSRLLSADADGQIKCWSMADHLANSWESSVGSLVEGDPIVALSWLHNGVKLALHVEKSGASSFGEKFSRVKFSPSLTLFGGKPMEGWIAVTVSGLVTVSLLKPSGQVLTSTESLCRLRGRVALADIAFTGGGNIVVATADGSSASPVQFYKVCVSVVSEKCRIDTEILPSLFMRCTTDLNRKDKFPAITHLKFLARDMSEQVLLCASSQTSSIVECWSLRKEGLPVNNIFQQISPVVGDKQPTILKWRILSATNDLDRVSAVALPKLPISLTNTDLKVASDTQFYPGLGLALAFHDGSVHIVHRLSLQTMAVFYSSATPRPVDEPAIKRPRTAGPAVHFKAMQLSWTSLALVGIDNQGKLSVLRLSPSMGHPLEVGLALRHLLFLLEYCMVTGYDWWDILLHVQPSMVQSLVEKLHEEYTRQTAALQQVLSTRILAMKASLCKLSPCTVTRVCDYHTKLFLIAISSTLKSLLRPHFLNTPDKSPGDRLTEICAKITDVDIDKVMINLKTEEFVLDMNTLQALQQLLQWVGDFVLYLLASLPNQGSLLRPGHSFLRDGTSLGMLRELMVVIRIWGLLKPSCLPVYTATSDTQDSMSLLFRLLTKLWICCRDEGPASEPDEALVDECCLLPSQLLIPSLDWLPASDGLVSRLQPKQPLRLQFGRAPTLPGSAATLQLDGLARAPGQPKIDHLRRLHLGACPTEECKACTRCGCVTMLKSPNRTTAVKQWEQRWIKNCLAVEGHGPDACVTSRAAEEAPAFVQLGPWPTYRPPRTPRSLDHPHPGDRL |
Length | 877 |
Position | Tail |
Organism | Papio anubis (Olive baboon) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi> Mammalia>
Eutheria> Euarchontoglires> Primates> Haplorrhini> Catarrhini>
Cercopithecidae> Cercopithecinae> Papio.
|
Aromaticity | 0.06 |
Grand average of hydropathy | -0.001 |
Instability index | 48.17 |
Isoelectric point | 7.49 |
Molecular weight | 96861.28 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
|
GO - Cellular Component | mediator complex GO:0016592 IEA:Ensembl
|
GO - Biological Function | catalytic activity GO:0003824 IEA:InterPro
thyroid hormone receptor binding GO:0046966 IEA:Ensembl
transcription coactivator activity GO:0003713 IEA:Ensembl
|
GO - Biological Process | positive regulation of transcription initiation from RNA polymerase II promoter GO:0060261 IEA:Ensembl
|
Interaction
Repeat regions
Repeats |
>MDP02114
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 632.29| 250| 296| 151| 444| 1
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142- 439 (350.79/329.91) KLALhvekSGASSFGeKFSRVKFSPSLtlfgGKPMEGWIAVT..........VSGLVTVSLL...KPSgQVltstESLC.RL.....RGRVALADIAFTgggNIVVATADGSSASPVQFYKVCvSVVSEKCRID.TEILPSL....FmrcttdLNRKDKFPAithlkflARdMSEqvlLCASSQTSSIVECW.SLRKEG..LPVNNI..FQQISPVVGD....................................................................................................kqptiLKWriLSATNDLdrVSAVAlPKLPISLT.NTDLKVASDTQFYPGLGLALAFHDGSVHIVHRLSLQTMAVFYSSATPRPVDEPAIKRPRTAGPAvhfKAMQLSWT
440- 623 (181.18/108.08) SLAL....VGIDNQG.KLSVLRLSPSM....GHPLEVGLALRhllflleycmVTGYDWWDILlhvQPS.MV....QSLVeKLheeytRQTAALQQVLST...RILAMKASLCKLSPCTVTRVC.DYHTKLFLIAiSSTLKSLlrphF......LNTPDKSPG.......DR.LTE...ICAKITDVDIDKVMiNLKTEEfvLDMNTLqaLQQLLQWVGD.................................................................................................................................................................................................................
729- 824 (100.32/48.40) ...........................................................................................................................................................................................................................fvlyllaslpnqgsllrpghsflrdgtslgmlrelmvviriwgllkpsclpvytatsdtqdsmsllfrlltklwiccrdegpasepdealvdeccllpsqllipsLDW..LPASDGL..VSRLQ.PKQPLRLQfGRAPTLPGSAATLQLDGLARAPGQPKIDHLRRLHLGACPTEECKACTRCGCVTMLKSPNRTTAV...KQWEQRWI
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 89.95| 23| 800| 70| 96| 2
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70- 96 (41.03/29.35) PWDLHSIPSEHReaitCLEWDQSGSRL
855- 877 (48.91/26.48) PWPTYRPPRTPR....SLDHPHPGDRL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 84.96| 25| 35| 647| 674| 5
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647- 674 (42.06/31.70) RDGTSL..GMLRELMVVIRIWGllkPSCLP
683- 709 (42.90/24.94) QDSMSLlfRLLTKLWICCRDEG...PASEP
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