<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP02101

Description Uncharacterized protein
SequenceMWNQKQSIGKERKELSTANQLVGIAIDKDKGSQLALKWATENLLVKGQTAILIHVKLKSSTYPGSSMASPKVMSASDAGNVNGNVLVSKDIDPITRDLFLPFRCFCTRKDIFCKDIVVEDLDVAKALIEYVTQAGIENLVVGSTSKNSFLRLKTTDIPGSVVKGAPDFCNVYVISRSKIQTIRSASRPAPVSSPLRSLLLSQTVVKSHSAESLVPQIQTTRPEKPPLEAARRSQDNIEFRSPFTRKGYNGKMPGEVSLPDTDISFVSSGRPSVDRLFPTLFDNVDTGRVPPRLSSGNDAELYNSFESQQFGRKSVDGRKSVDGRKSVDGRKSVDVNYPPEFLSVFSESDRLSTSSQSMEEVEAEMRRLKLELKQTMEMYSTACKEALTAKQKAVELQRWKSEEERRIEEARFAEEAALAMVEQEKAKSRAAIEAAEAAKRIAELESQKRINAEKKAFKEAEEKKKALDALANNDVRYRKYSIEEIETATEFFSESLKIGEGGYGPVYKGYLDHTPVAIKVLRPDAAQGRSQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEFMAHGSLDDCLFRRGQNSKPLSWQRRFKIAAEIGTALLFLHQTKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVANSVTQYRMTSTAGTFCYIDPEYQQTGMLGVKSDIYSLGIMFLQMITARAPMGLTHHVGRAIEKGNLSEILDPSVTDWPAEETLCFAELALKCAELRRKDRPDLGKVVLPELIRFQSVAETSIFVPRMDSVNSPEFSSSQASMRRDSDCFSSQSNDSFEVLSRSES
Length810
PositionTail
OrganismCucumis sativus (Cucumber)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Cucurbitales> Cucurbitaceae> Benincaseae> Cucumis.
Aromaticity0.07
Grand average of hydropathy-0.391
Instability index51.43
Isoelectric point8.23
Molecular weight90192.72
Publications
PubMed=19881527
PubMed=19495411
PubMed=20565788
PubMed=22047402

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP02101
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      40.34|      13|      15|     347|     359|       1
---------------------------------------------------------------------------
  347-  359 (22.08/11.03)	ESDRLSTS.SQSME
  364-  377 (18.26/ 8.13)	EMRRLKLElKQTME
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     102.58|      24|      24|     413|     436|       2
---------------------------------------------------------------------------
  380-  401 (26.55/21.09)	..STACKEALT.....AKQKAVELQRWKS
  402-  425 (25.38/19.74)	EEERRIEEA.....rfAEEAALAMVEQEK
  426-  448 (18.98/12.37)	AKSRAAIEAAEaakriAE......LESQK
  452-  475 (31.67/27.01)	AEKKAFKEAEE.....KKKALDALANNDV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     211.00|      63|      64|     188|     251|       3
---------------------------------------------------------------------------
  140-  200 (64.81/32.66)	...VVGSTSKNSFL.....RLKTT...DIPGSVVKGAPDfcN.VY....VisRS.KI.QTIRSASrPAPVSSPLRSLLL
  201-  265 (100.39/57.96)	SQTVVKSHSAESLVP....QIQTTRPeKPPLEAARRSQD..N.IE....F..RS.PFTRKGYNGKmPGEVSLPDTDISF
  266-  318 (45.79/21.09)	VSS..GRPSVDRLFPtlfdNVDTGRV..PP....RLSSG..NdAElynsF..ESqQFGRKSVDGR..............
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      70.86|      20|     264|     521|     540|       5
---------------------------------------------------------------------------
  521-  540 (34.50/20.05)	LRPDAAQGRSQFQQEVEVLS
  787-  806 (36.35/21.49)	MRRDSDCFSSQSNDSFEVLS
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP02101 with Med32 domain of Kingdom Viridiplantae
Unable to open file!