<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP02097

Description Uncharacterized protein
SequenceMSKLIDPFTADSDISFVSSGRRSIDHCFPGAWNSNAATGSDSSLLSNASEFEVFSPGSTSLMLEMGERTNKYVDSSTNDHYNNTSSFHQDMSFCSSPSETFSWPSNSHAQDDVEAEMRRLKLELKQTMDMYSTACKEALTAKQKAMELHRWKVEEEQRFEAARMGEEAALAMAEKEKIKCKAAMEAAEAAQKNAALEAKRRAKVEKMVDMEAQEMRRTLSFSGYGHAEIGYRKYEIQEIETATKGFSESLKIGEGGYGPVFRGELDHTPVAIKVLRPDAAHGRSQFQQEVEVLSCIRHPNMVLLLGACPEKGCLVYEFMANGSLEDCLFRKANDPILSWQLRFRIAAEIATGLLFLHQTRPEPIVHRDLKPGNILLDSNYVSKISDVGLARLVPPSVADSVTQYRMTATAGTFFYIDPEYQQTGLLGIKSDVYSLGVMLLQIITARPPIGLAHAVERAIEKGKFAEMLDPEVKDWPVEDALKFAKLSIKCAEMRKRDRPDLGKVVLPELNRLRTMAEESMGLGSFSCSSTCSSPYASQTSQEMMNSVQRRVGAWIDTSSSQSDSSSSSYSREKPYWLD
Length578
PositionTail
OrganismCucumis sativus (Cucumber)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Cucurbitales> Cucurbitaceae> Benincaseae> Cucumis.
Aromaticity0.08
Grand average of hydropathy-0.412
Instability index49.00
Isoelectric point5.64
Molecular weight64420.32
Publications
PubMed=19881527
PubMed=19495411
PubMed=20565788
PubMed=22047402

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP02097
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     138.40|      35|      47|      20|      64|       1
---------------------------------------------------------------------------
   20-   55 (58.80/35.27)	GRRS...IDHCFPGAWNSNAATGSDSSLLSNASEfEVFS
   66-  102 (56.71/43.67)	GERTnkyVDSSTNDHYNNTSSFHQDMSFCSSPS..ETFS
  552-  572 (22.89/ 6.57)	.............GAWIDTSSSQSDSSSSSYSRE.....
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      67.44|      21|      23|     211|     231|       3
---------------------------------------------------------------------------
  211-  231 (39.05/21.84)	EAQEMRR.TLSFS.GYGHAEIGY
  235-  257 (28.38/14.25)	EIQEIETaTKGFSeSLKIGEGGY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      67.30|      23|      23|     156|     178|       6
---------------------------------------------------------------------------
  156-  178 (36.98/24.56)	EQRFEAARMGE.EAALAMAEKEKI
  181-  204 (30.32/18.85)	KAAMEAAEAAQkNAALEAKRRAKV
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP02097 with Med32 domain of Kingdom Viridiplantae
Unable to open file!