<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP02061
Description |
Uncharacterized protein |
Sequence | MDDRSIGMFWVVSYTMAQPACETVMNWLTSAGAPELSSAQNLQTNERIMVMREVSPLPMSLLSGFSMNLCSKLAYQMEESLFSGQAVPSIALAETYTRLLLLAPHSLFRSHFNHLAQRNPSLLSRPGVTLLVLEILNYRLLPLYRYQGKSKALMYDVTKIISALKGKRGDHRVFRLAENLCMNLIFSLRDFFFVKREGKGPTEFTETLNRLAVVTLAILIKTRGIADADHLLYLQTMLEQTMATSQHTWSEKTLRYFPPVLREVLIGRIDKRGVAIQAWQQAETTVINQCNQLLSPSADPTYVMTYISHSFPQHKQYLCAGAWILMQGHPESINCTTLARVLREFSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANLSFFVWTQELLPLDILLLAFIDRDDDPNALRIVISLLDRQELQQRVKLYCISRGSPEHWLHSVVFKRNELQKALGNHLSWKDRYPVFFDDIAARLLPIIPLIVYRLIENDAVDQADRLLALYSPFLAYHPLRFTFVRDILAYFYSHLPNKLIVRILYVLDISKIPFSESFPTHISSPGPVMCPPMDYFATLLLGLVNNVIPSLQTSKSGTVGDNSSSSMRPSHNKSPATNPPVATSAPESQKAFYQIQDPGTYTQLVLETAVIELLSLPVSAGQIVSSLVQIVVNIQPTLIQSSNNLHVAPSSMGQGSAIPTSPSGGSTDSLNAGRSNTSVSGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQEFHGQLYLEASRIIKETWWLSDATRSLGELNSAVGYSLMDPTWAAQDNTSTAIGNTVALLHSLFSNLPQEWLEGAHVIIKHLRPVTSVAMLRIVFRIIGPLLPKLANAHSLFCKTLSSLLSVMVDVFGKNSQTSIPVEAAEIADLIDFLHHVVHYEGQGGPVVASSKPRQEVLAIIGRALENLRPDVQHLLSHLKPDTTTSIYAATHPKLVQNPA |
Length | 967 |
Position | Tail |
Organism | Cucumis sativus (Cucumber) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> fabids> Cucurbitales> Cucurbitaceae> Benincaseae> Cucumis.
|
Aromaticity | 0.08 |
Grand average of hydropathy | 0.063 |
Instability index | 41.18 |
Isoelectric point | 7.04 |
Molecular weight | 107664.09 |
Publications | PubMed=19881527
PubMed=19495411
PubMed=20565788
PubMed=22047402
|
Function
Annotated function |
|
GO - Cellular Component | mediator complex GO:0016592 IBA:GO_Central
transcription regulator complex GO:0005667 IBA:GO_Central
|
GO - Biological Function | |
GO - Biological Process | positive regulation of gene expression GO:0010628 IBA:GO_Central
regulation of transcription by RNA polymerase II GO:0006357 IBA:GO_Central
|
Interaction
Repeat regions
Repeats |
>MDP02061
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 57.92| 18| 21| 475| 492| 1
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475- 492 (31.36/20.23) DIAARLLPII.PLIVYRLI
498- 516 (26.56/15.88) DQADRLLALYsPFLAYHPL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 166.57| 41| 324| 421| 465| 2
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421- 461 (72.71/46.91) LLDRQELQQRVKLY.CISR.GSPEHWLHSVVFKRNELQKAL.GN
752- 787 (36.83/20.73) ....QEFHG..QLYlEASRiIKETWWLSDATRSLGELNSAV.G.
790- 827 (57.03/34.03) LMDPTWAAQDNTST.AI...GNTVALLHS.LFS.NLPQEWLeGA
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 106.32| 32| 708| 125| 232| 3
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68- 99 (53.91/99.09) NLCSKLAYQMEESLF.SGQAVPSIALAETYTRL
179- 211 (52.41/44.58) NLCMNLIFSLRDFFFvKREGKGPTEFTETLNRL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 84.83| 26| 323| 604| 635| 4
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604- 635 (43.22/35.79) MRP......SHNKSPATNPPVATSAPEsqkafyQIQDP
935- 966 (41.61/22.21) LRPdvqhllSHLKPDTTTSIYAATHPK......LVQNP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 88.25| 25| 539| 347| 372| 8
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347- 372 (42.52/29.79) PEEvTANIYTMVDVLLHHIQIEPQHG
888- 912 (45.73/27.77) PVE.AAEIADLIDFLHHVVHYEGQGG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 80.22| 22| 325| 517| 541| 11
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248- 269 (40.68/19.54) TWSEKTLRYFPPVLREVLIGRI
519- 540 (39.54/20.12) TFVRDILAYFYSHLPNKLIVRI
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