<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP02059

Description Uncharacterized protein
SequenceMAIYGCSAALHYKSREHSILSNAAGRRTWASLTGNSACGGRFDAKSCIIMEVTADQAKRNHMLLPSSSVVAVAISGKKNSKYIIRWSLEKFLPEGIIDFRLLHFIPRITSVPTPMGNAIPISQVREDVAAAYRKEIWWHTSEKLLPFKKMFAQRKVHLDVVTLEADDVAGAIIEEVTKCSINKLVIGVSSQGLFSRKLSGLSSRISALAPRYCTVYAISKGKLASIRPPDMDTNVSIRDDASEESSASSYSSYTSSSLTDGSSSLTSSYSHFPSPSPSLPLQRFQALSTINQPLLTKKPSPIKADHSRCQSVDIENQVDGVHSSSYVSDCIQTLSRASSSKSSPAENKSWNSDEASSSGMFNDYSSCESQADVSFELEKLRIELRHARGMFAIAQRETIDASRELNHLNNQRSEEARKLEEINNKAVAAKEFAREERVKHEALRREAKYVKERAEREGIYRKEAEMKALQNAKEKGKHENALQGPLQQYQHFQWEDIVSATSSFSEDLKIGMGAHGTVYKCSLHHTTVAVKVLHSRDSHKQMQLLQELEVLSRIHHPHLLLLLGACPDKNCLVYEYMENGSLEDRLYRRGNTPAIPWYERFRIAWEIASALVFLHSSKPKSIIHRDLKPANILLDQNLVSKIGDVGLSTVFNSDPSMSTAFMNSGPVGTLCYIDPEYQRTGLISPKSDVYAFGMVILQLLTAKPAVALTHVVETAIDNSNLINVLDIEAGHWPLEETYELARLGLRCAEMQRKDRPDLKDQVLPLLMTLKKVADKARNLASKVPAAIPNHFICPILQDVMNDPCVAADGYTYDRQAIEKWLQKNDNSPMTKLPLPDKNLIPNYSLLSAIVEWNSKRS
Length857
PositionTail
OrganismCucumis sativus (Cucumber)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Cucurbitales> Cucurbitaceae> Benincaseae> Cucumis.
Aromaticity0.07
Grand average of hydropathy-0.352
Instability index42.79
Isoelectric point8.50
Molecular weight95615.88
Publications
PubMed=19881527
PubMed=19495411
PubMed=20565788
PubMed=22047402

Function

Annotated function Functions as an E3 ubiquitin ligase. 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP02059
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     161.70|      57|      58|     378|     435|       1
---------------------------------------------------------------------------
  378-  399 (19.32/ 7.36)	..............................................EKLRIEL..RHARGMFAIAQRETI
  400-  459 (79.75/59.54)	DASRELNHLNNQRsEEARKLEEINNKAVAAKEFARE..........ERVKHEAlrREAKYVKERAEREGI
  461-  516 (62.63/41.47)	RKEAEMKALQNAK.EKGKHENALQGPLQQYQHFQWEdivsatssfsEDLKIGM...GAHG..........
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     169.88|      55|     127|     178|     247|       2
---------------------------------------------------------------------------
  178-  236 (80.91/74.79)	KCSINKLVIGVSSqglFSRKLSGLSSRISALA.PRYCTVYAISKgKLASIRPPDMDTNVS
  252-  307 (88.97/49.09)	SYTSSSLTDGSSS...LTSSYSHFPSPSPSLPlQRFQALSTINQ.PLLTKKPSPIKADHS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     201.13|      66|      72|     686|     754|       3
---------------------------------------------------------------------------
  675-  746 (99.08/80.18)	PEYQRTGlispKSDVYAFGMVILQLltAKPAVALTHVVETAIDNSNLINVL.DIEAGHWPLEETYELARLGLR
  748-  818 (102.05/69.89)	AEMQRKDrpdlKDQVLPLLMTLKKV..ADKARNLASKVPAAIPNHFICPILqDVMNDPCVAADGYTYDRQAIE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     130.00|      38|     318|       6|      47|       5
---------------------------------------------------------------------------
    6-   47 (60.36/55.62)	CSAALhykSREHSILSNAAGRRTWASlTGNSACGGRFDAKSC
  330-  367 (69.63/48.62)	CIQTL...SRASSSKSSPAENKSWNS.DEASSSGMFNDYSSC
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      45.82|      14|      15|     531|     545|       6
---------------------------------------------------------------------------
  531-  545 (20.32/19.96)	KVLhSRDSHKQMQLL
  549-  562 (25.50/18.19)	EVL.SRIHHPHLLLL
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP02059 with Med32 domain of Kingdom Viridiplantae
Unable to open file!