<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP02056

Description Uncharacterized protein
SequenceMAKPKALFLKLSFSLSSFLYFFNSFHPVFFPQHFTTSNWPNKSVQSGSKMAVSVQNNLWDRVTELTKVAQQKGVDPLLWAIQLSSNLNSAGVVLPSVELANLLVSHICWDNNEPVSWKFLEKALILNIVPPILVLALLTTRVISRRQFQPVAYRLYLELLRRHAFKLKSHIHGLKYKEVMASVDAVLCLSETFNLPANDPGTLVVEFIFSIVWQLLDATLADEGLLELIMEEKSKWPAKSPEMELDGHNGYDDKWTEQRERLRNVNIELTIEIIGKFLEDTVTSRILHLACRNMPSNWADLIQRLQLLGENSSVLRNSKSLDSEIFLQFTADTWTIFSQEFKQNSKQKFHPIRAFGSPAASASLCHRTRYSALWLPLDLVLEDAMDGYQVEATSAIEKITSLVKTLKAVNGTSWHDTFLGLWIASLRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLIEEEEIATIDETEYVASHHWKEKKTPGKCRNELISSLQILGEYQSLLTPPQDVISACNQAAAKAMMFISGISVNNAYFECINMKDMPMNSSAGNMRHLIVEACIARNLLDTSAYYWRGYVNGCISQMPQSIPPQAPGWSAFMKGALLNHIMINVLTSTPASSLAELEKIFEIAVKGSDEEKISAATILCGASLIRGWNIQEHTVHYITRLLSPPVPTDYSGCESHLIGYAPMLNVLIVGIASIDCVQIFSLHGLVPQLACSLMPICEVFGSCVPNLNWTLSTGEEISAHAVFSNAFTLLLKLWRFNHPPLDHGVGDAPTVGSQLTPEYLLLVRNSHLVSGNVHKDRNKMRLSAVASSSSPQPIFVDSFPKLKVWYRQHQACIASTLSGHVHGNPVHQTVDGLLNMMFRRINGGSQPLTSVTSGSSSSSGAGNEDPSLRPKLPAWDIMEAVPFVIDAALTACAHGKLSPRELATGLKDLADFLPASLATIVSYFSAEVTRGLWKPVYMNGTDWPSPAENLSNVEEQIKKILAATGVDVPSLAAGGSSPATLPLPLAAFVSLTITYKIDRASQRFLNLAGPALESLAAGCPWPCMPIVASLWTQKAKRWSDFLVFSASRTVFLQNCDAVVQLLKSCFTATLGLTANPLSSNGGVGALLGHGFGSHFCGGISPVAPGILFLRVYRSIRDVALLVEEILSLLMDSVREIACNGAGKDKSGKLKTTNNAKRYGQISLSSAMTQVKLAASLGASLVWLSGGLVLVQSVIKETLPSWFISVHRSEQEKCSEGIVSMLGGYALAYFAVLCGAFAWGTDSSSSASKRRPKILGVHMEFLASALDGKISLGCDWATWRAYVTGFVSLMVGCTPSWVLDVDVEVLKRLSSGLRQWNEEELALALLGLGGVGAIGAAAELIIESEF
Length1375
PositionTail
OrganismCucumis sativus (Cucumber)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Cucurbitales> Cucurbitaceae> Benincaseae> Cucumis.
Aromaticity0.08
Grand average of hydropathy0.144
Instability index44.96
Isoelectric point6.51
Molecular weight150568.22
Publications
PubMed=19881527
PubMed=19495411
PubMed=20565788
PubMed=22047402

Function

Annotated function 
GO - Cellular Component
integral component of membrane	GO:0016021	IEA:UniProtKB-KW
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP02056
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      93.74|      27|      42|     988|    1017|       1
---------------------------------------------------------------------------
  988- 1017 (39.99/23.99)	KKILAATGVDVPSLAAGGSSPAtlpLPLAA
 1032- 1058 (53.75/25.62)	QRFLNLAGPALESLAAGCPWPC...MPIVA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     160.92|      41|      45|     654|     698|       2
---------------------------------------------------------------------------
  654-  695 (71.64/44.81)	LIRGWN....IQEHTV.H.YITRLLSPPVPTDYSGCEsHLIGY.APMLN
  700-  738 (35.78/22.01)	...GIAsidcVQIFSL.HgLVPQLACSLMPI....CE..VFGScVPNLN
  741-  779 (53.50/27.16)	LSTGEE....ISAHAVfS.NAFTLLLKLWRFNHPPLD.HGVGD.AP...
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     114.49|      29|     159|     193|     222|       3
---------------------------------------------------------------------------
  193-  222 (45.94/34.85)	FNLPANdPGTLVVEFIFSIVWQLLDATLAD
  355-  383 (48.69/31.84)	FGSPAA.SASLCHRTRYSALWLPLDLVLED
  388-  406 (19.86/ 8.13)	YQVEA....TSAIEKITSLVKTL.......
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     105.80|      32|     191|     278|     315|       5
---------------------------------------------------------------------------
  282-  315 (53.10/46.28)	VTSRilHLACRNMPSN.WADLIQRLQLLGENSSVL
  476-  508 (52.70/29.71)	VASH..HWKEKKTPGKcRNELISSLQILGEYQSLL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     221.41|      80|      94|    1138|    1231|       7
---------------------------------------------------------------------------
 1138- 1231 (100.60/99.80)	FLRVYRSIRDVAllVEEILSLLMD...SVREIACnGA...GKDKSgkLKTtnnAKRYGQI......SLSSAMTQvKLaaSLGAS.LVWLS..GGLvlVqSVIKETLPSW
 1232- 1326 (120.81/72.51)	FISVHRSEQEKC..SEGIVSMLGGyalAYFAVLC.GAfawGTDSS..SSA...SKRRPKIlgvhmeFLASALDG.KI..SLGCDwATWRAyvTGF..V.SLMVGCTPSW
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      73.35|      20|     734|     224|     245|       8
---------------------------------------------------------------------------
  224-  245 (32.44/26.04)	GLLELIMEEKSKWPakSPEMEL
  961-  980 (40.91/26.57)	GLWKPVYMNGTDWP..SPAENL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      53.67|      16|      67|     817|     835|       9
---------------------------------------------------------------------------
  817-  835 (27.03/24.65)	SSSSP....QPIFVdsfPKLKVW
  886-  905 (26.64/14.77)	SSSSGagneDPSLR...PKLPAW
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP02056 with Med33 domain of Kingdom Viridiplantae
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