<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP02043

Description Uncharacterized protein
SequenceMWLQKGNSVNSVKKVGAGGGGNGLVAIGIDREKGSQNALRWAAEHLIGKGQTVILIHVVHRPSSAAASLIGEAIICNTDGSSTSDSPHIQQLEMQTRDIFLTFHCYCTRKDIQCLDIILEDTDIVKALTEYVSYAAIETLVLGAPSRHGFIRFKSSSMGSSVSKGAPDFCTVYVISKGKVSSVKNASRSAPFTSPLLDRLQKLSKPIVKGSITPRHKFNLRDRTSFKPRSFQDETIKSPYSHGGERTCISKFSGGFSESESDISFISSGRPSTDRSSSVAFDYSDSGPPRFSTSSEHSFTSLPFKPKWADLSNLNDFSSVSDESCRTSCSWSSQNLDEVELEMRRLKLELKQTMEMYSTACKEALTAKQKAMELNNWRREEEQKLEEARLAQEAAMAIAEQERARCRAAMEAADAAKRIAELESHKRANLEMKAVKEAEEMQKALKNLAQSDIRYRRYSIEEVESATEHFAQSRKIGEGGYGPVFRCRLDHTSVAVKVLRPDATQGRTQFQQEIDILSCIRHPNMVLLLGACPEYGILVYEYMSNGSLEDRLFRKGNTPVIPWQLRFRIAAEIATGLLFLHQTKPEPLVHRDLKPANILLDHNYVSKISDVGLARLLPAVAENVTQCYVTSAAGTFCYIDPEYQQTGMLGVKSDVYSLGIMLLQLITAKPAMGLAHHVARSIEKGTFQEFLDPAVVDWPVEQTLCFAKLALECAELRRKDRPDLASVVLPELEKLREFGEEMMEHMESRDSSGSISSFSHPSTEQDVMSDPQLMMISESSKSPSSISSQVEEE
Length793
PositionTail
OrganismCucumis sativus (Cucumber)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Cucurbitales> Cucurbitaceae> Benincaseae> Cucumis.
Aromaticity0.07
Grand average of hydropathy-0.355
Instability index49.29
Isoelectric point6.26
Molecular weight88109.09
Publications
PubMed=19881527
PubMed=19495411
PubMed=20565788
PubMed=22047402

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP02043
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      89.77|      21|      22|     391|     411|       1
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  367-  390 (24.45/12.48)	AKQKAMELNNwrrEEEQKLEEARL
  391-  411 (34.87/20.53)	AQEAAMAIAE...QERARCRAAME
  412-  431 (30.45/17.11)	AADAAKRIAE...LESHK.RANLE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     103.94|      34|      75|     594|     628|       2
---------------------------------------------------------------------------
  594-  628 (55.04/42.20)	KPAnILLDHNYVSKISDVGLARLL.PAVAE.NVTQ..CY
  669-  706 (48.90/32.20)	KPA.MGLAHHVARSIEKGTFQEFLdPAVVDwPVEQtlCF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      44.03|      13|      22|     439|     451|       3
---------------------------------------------------------------------------
  439-  451 (21.75/15.42)	EEMQKALKNLAQS
  461-  473 (22.28/15.97)	EEVESATEHFAQS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     115.88|      34|      75|     226|     262|       6
---------------------------------------------------------------------------
  226-  262 (53.18/39.55)	FKPRsFQDETIKSPYSHGGERTCisKFSGGFSESESD
  304-  337 (62.69/36.38)	FKPK.WADLSNLNDFSSVSDESC..RTSCSWSSQNLD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      37.53|      11|      27|      19|      29|       8
---------------------------------------------------------------------------
   19-   29 (18.88/14.18)	GGGNGLVAIGI
   48-   58 (18.65/13.91)	GKGQTVILIHV
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP02043 with Med32 domain of Kingdom Viridiplantae
Unable to open file!