Description | Mediator complex subunit 12 |
Sequence | MAAFGILSYEHRPLKRLRLGPPDVYPQDPKQKEDELTALNVKQGFNNQPAVSGDEHGSAKNVNFNPAKISSNFSSIIAEKLRCNTLSDTGRRKSLMNQKDNFWLVTARSQSAINTWFTDLAGTKPLTHLAKKVPIFSKKEEVFGYLAKYTVPVMRAAWLIKMTCAYYAAMSETKVKKKNTADPFTEWTQIITKYLWEQLQKMAEYYRPGPAGSGVCGSAIGPLPHDVEMAIRQWDYNEKLALFMFQDGMLDRHEFLTWVLECFEKIRPGEDELLKLLLPLLLRYSGEFVQSAYLSRRLAYFCTRRLALQLDGVNSHSSHVISAQSTSSLPTTPAPQPPTSNTPSTPFSDLLMCPQHRPLVFGLSCILQTILLCCPSALVWHYSLTDSRIKTGSPLDHLPIAPSNLPMPEGNSAFTQQVRAKLREIEQQIKERGQAVEVRWSFDKCQEATAGFTIGRVLHTLEVLDSHSFERSDFSNSLDSLCNRIFGLGPSKDGHEISSDDDAVVSLLCEWAVSCKRSGRHRAMVVAKLLEKRQAEIEAERCGESEAADEKGSVASGSLSAPSAPIFQDVLLQFLDTQAPMLTDPRSESERVEFFNLVLLFCELIRHDVFSHNMYTCTLISRGDLAFGTPGPRPPSPFDDPADDPERKEAEGSSSSKLEDPGLSESMDIDPSSSVLFEDMEKPDFSLFSPTMPCEGKGSPSPEKPDVEKDVKPPPKEKIEGTLGILYDQPRHVQYATHFPIPQEESCSHECNQRLVVLFGVGKQRDDARHAIKKITKDILKVLNRKGTAETDQLAPIVPLNPGDLTFLGGEDGQKRRRNRPEAFPTAEDIFAKFQHLSHYDQHQVTAQVSRNVLEQITSFALGMSYHLPLVQHVQFVFDLMEYSLSISGLIDFAIQLLNELSVVEAELLLKSSDLVGSYTTSLCLCIVAVLRHYHACLILNQDQMAQVFEGLCGVVKHGMNRSDGSSAERCILAYLYDLYTSCSHLKSKFGELFSDFCSKVKNTIYCNVEPSESNMRWAPEFMIDTLENPAAHTFTYTGLGKSLSENPANRYSFVCNALMHVCVGHHDPDRVNDIAILCAELTGYCKSLSAEWLGVLKALCCSSNNGTCGFNDLLCNVDVSDLSFHDSLATFVAILIARQCLLLEDLIRCAAIPSLLNAACSEQDSEPGARLTCRILLHLFKTPQLNPCQSDGNKPTVGIRSSCDRHLLAASQNRIVDGAVFAVLKAVFVLGDAELKGSGFTVPGGTEELPEEEGGGGSSGRRQGGRNISVETASLDVYAKYVLRSICQQEWVGERCLKSLCEDSNDLQDPVLSSAQAQRLMQLICYPHRLLDSEDGENPQRQRIKRILKNLDQWTMRQSSLELQLMIKQTPNTEMNSLLENIAKATIEVFQQSAETGSSSGSTASNMPSSSKAKPVLSSLERSGVWLVAPLIAKLPTSVQGHVLKAAGEELEKGQHLGSSSRKERDRQKQKSMSLLSQQPFLSLVLTCLKGQDEQREGLLASLHSQVHQIVINWRENQYLDDCKPKQLMHEALKLRLNLVGGMFDTVQRSTQQTTEWAQLLLEIIISGTVDMQSNNELFTTVLDMLSVLINGTLAADMSSISQGSMEENKRAYMNLVKKLQKDLGERQSDSLEKVHQLLPLPKQNRDVITCEPQGSLIDTKGNKIAGFDSIFKKEGLQVSTKQKISPWELFEGLKPSTAPLSWAWFGTVRVDRRVARGEEQQRLLLYHTHLRPRPRAYYLEPLPLPPEDEEPPAPALLEPEKKAPEPPKTDKPGTAPPSTEERKKKSTKGKKRSQPATKSEDYGMGPGRSGPYGVTVPPDLLHHANPGSISHLSYRQSSMGLYTQNQPLPAGGPRVDPYRPVRLPMQKLPTRPTYPGVLPTTMTTVMGLEPSSYKTSVYRQQQPTVPQGQRLRQQLQAKIQSQGMLGQSSVHQMTPSSSYGLQSSQGYTSYVSHVGLQQHTGPAGTMVPPSYSSQPYQSTHPSTNPTLVDPTRHLQQRPSGYVHQQAPTYGHGLTSTQRFSHQTLQQTPMMGTMTPLSAQGVQAGVRSTSILPEQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQYHIRQQQQQQQILRQQQQQQQQQQQQQQQQQQQQQQQPQQQQPHQQQQQAAPPQPQPQSQPQFQRQGLQQTQQQQQTAALVRQLQQQLSNTQPQPSTNIFGRY |
Length | 2190 |
Position | Kinase |
Organism | Rattus norvegicus (Rat) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi> Mammalia> Eutheria> Euarchontoglires> Glires> Rodentia> Myomorpha> Muroidea> Muridae> Murinae> Rattus. |
Aromaticity | 0.07 |
Grand average of hydropathy | -0.517 |
Instability index | 58.02 |
Isoelectric point | 6.78 |
Molecular weight | 244535.34 |
Publications | PubMed=15057822 PubMed=22673903 |
Annotated function |
|
GO - Cellular Component | mediator complex GO:0016592 ISO:RGD nucleus GO:0005634 ISO:RGD ubiquitin ligase complex GO:0000151 IDA:RGD |
GO - Biological Function | beta-catenin binding GO:0008013 IEA:InterPro chromatin binding GO:0003682 ISO:RGD protein C-terminus binding GO:0008022 ISO:RGD protein domain specific binding GO:0019904 ISO:RGD RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000978 ISO:RGD thyroid hormone receptor binding GO:0046966 ISO:RGD transcription coactivator activity GO:0003713 ISO:RGD transcription coregulator activity GO:0003712 ISO:RGD transcription factor binding GO:0008134 ISO:RGD |
GO - Biological Process | axis elongation involved in somitogenesis GO:0090245 ISO:RGD canonical Wnt signaling pathway GO:0060070 ISO:RGD embryonic brain development GO:1990403 ISO:RGD embryonic neurocranium morphogenesis GO:0048702 ISO:RGD embryonic organ development GO:0048568 ISO:RGD endoderm development GO:0007492 ISO:RGD heart development GO:0007507 ISO:RGD neural tube closure GO:0001843 ISO:RGD neural tube development GO:0021915 ISO:RGD oligodendrocyte development GO:0014003 ISO:RGD positive regulation of transcription by RNA polymerase II GO:0045944 ISO:RGD positive regulation of transcription initiation from RNA polymerase II promoter GO:0060261 ISO:RGD positive regulation of transcription, DNA-templated GO:0045893 ISO:RGD post-anal tail morphogenesis GO:0036342 ISO:RGD protein ubiquitination GO:0016567 IDA:RGD regulation of transcription by RNA polymerase II GO:0006357 IBA:GO_Central Schwann cell development GO:0014044 ISO:RGD somitogenesis GO:0001756 ISO:RGD spinal cord development GO:0021510 ISO:RGD stem cell population maintenance GO:0019827 ISO:RGD Wnt signaling pathway, planar cell polarity pathway GO:0060071 ISO:RGD |
Binary Interactions |
Repeats | >MDP01943 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 8| 244.61| 15| 15| 2056| 2070| 1 --------------------------------------------------------------------------- 1905- 1919 (21.38/ 6.14) PTVPQGQ..RL....RQQLQA 2056- 2070 (36.82/16.51) QQQQQQQ..QQ....QQQQQQ 2073- 2087 (36.82/16.51) QQQQQQQ..QQ....QQQQQQ 2092- 2108 (31.28/12.79) QQQQQQQilRQ....QQQQQQ 2109- 2123 (36.82/16.51) QQQQQQQ..QQ....QQQQQQ 2124- 2138 (30.91/12.54) QPQQQQP..HQ....QQQQAA 2141- 2155 (26.49/ 9.57) QPQPQSQ..PQ....FQRQGL 2156- 2174 (24.08/ 7.95) QQTQQQQ..QTaalvRQLQQQ --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 273.79| 79| 345| 602| 705| 2 --------------------------------------------------------------------------- 614- 705 (126.53/86.83) MYTCTLISRGDLAFGTPGPRPPSpfddpADDPERKEAEGSSSSKledPGL.SESMDIDPSSSVLFEDMEKPDFSLFSPTmpcegKGSPSPEKP 1727- 1771 (85.68/36.17) LYHTHLRPRPRAYYLEPLPLPP...........................................EDEEPPAPALLEPE.....KKAPEPPKT 1774- 1822 (61.59/23.34) ................PGTAPPS.....TEERKKKSTKGKKRSQ...PATkSEDYGMGPGRSGPYGVTVPPDL.................... --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 77.10| 28| 611| 523| 552| 3 --------------------------------------------------------------------------- 523- 552 (42.61/35.59) AMVVAK...LLEK..RQAEIEA...ERCGESEAadEKG 1134- 1169 (34.49/21.38) AILIARqclLLEDliRCAAIPSllnAACSEQDS..EPG --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 121.09| 37| 233| 1597| 1654| 4 --------------------------------------------------------------------------- 1597- 1654 (49.97/65.10) ADMSSISQgsmeenkraymnlvkklqkdLGERQSdSLEKVHQLLPLPKQNRDVITCEP 1826- 1862 (71.12/41.60) ANPGSISH....................LSYRQS.SMGLYTQNQPLPAGGPRVDPYRP --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 224.38| 67| 231| 746| 845| 5 --------------------------------------------------------------------------- 779- 845 (118.15/100.73) ILKVLNRKGTAETDQLAPIVPLNPGDLTFLGGEDGQKRRRN..RPEAFPTAE.DIFAKFQHLSHYDQHQV 1224- 1293 (106.23/46.04) VLKAVFVLGDAELKGSGFTVPGGTEELPEEEGGGGSSGRRQggRNISVETASlDVYAKYVLRSICQQEWV --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 123.81| 48| 610| 1356| 1426| 6 --------------------------------------------------------------------------- 406- 433 (30.52/ 6.61) PMPEGNSAFTQQVRAKLrEIEQQIKERG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 1334- 1354 (20.19/21.41) ............................qavevrwsfdkcqeatagftigrvlhtlevldshsfersdfsnsldslcnrifglgpskdgheissdddavvsllcewavsckrsgrhramvvakllekrqaeieaercgeseaadekgsvasgslsapsapifqdvllqfldtqapmltdprseserveffnlvllfcelirhdvfshnmytctlisrgdlafgtpgprppspfddpaddperkeaegsssskledpglsesmdidpsssvlfedmekpdfslfsptmpcegkgspspekpdvekdvkpppkekiegtlgilydqprhvqyathfpipqeescshecnqrlvvlfgvgkqrddarhaikkitkdilkvlnrkgtaetdqlapivplnpgdltflggedgqkrrrnrpeafptaedifakfqhlshydqhqvtaqvsrnvleqitsfalgmsyhlplvqhvqfvfdlmeyslsisglidfaiqllnelsvveaelllkssdlvgsyttslclcivavlrhyhaclilnqdqmaqvfeglcgvvkhgmnrsdgssaercilaylydlytscshlkskfgelfsdfcskvkntiycnvepsesnmrwapefmidtlenpaahtftytglgkslsenpanrysfvcnalmhvcvghhdpdrvndiailcaeltgyckslsaewlgvlkalccssnngtcgfndllcnvdvsdlsfhdslatfvailiarqcllledlircaaipsllnaacseqdsepgarltcrillhlfktpqlnpcqsdgnkptvgirsscdrhllaasqnrivdgavfavlkavfvlgdaelkgsgftvpggteelpeeeggggssgrrqggrnisvetasldvyakyvlrsicqqewvgerclkslcedsndlqdpvlssaqaqrlmqlicyphrlldSEDGENPQRQRIKRILKNLDQ 1372- 1423 (73.10/48.95) PNTEMNSLLENIAKATI.EVFQQSAETG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................sssgSTASNMPSSSKAKPVLSSLER --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 79.48| 25| 231| 217| 277| 8 --------------------------------------------------------------------------- 249- 277 (41.53/88.82) MLDRHEFLTWVLECFEkirpGEDE....LLKLL 1476- 1504 (37.96/ 8.42) LLSQQPFLSLVLTCLK....GQDEqregLLASL --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 109.08| 29| 234| 321| 381| 10 --------------------------------------------------------------------------- 330- 358 (59.74/61.42) PTTPAPQPPTSNTPST.P.FSDLLMCPQHRP 1970- 2000 (49.33/ 8.55) PPSYSSQPYQSTHPSTnPtLVDPTRHLQQRP --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 129.60| 33| 342| 1668| 1702| 12 --------------------------------------------------------------------------- 1668- 1702 (52.98/34.87) GFDSIFK.....KEGLQVStkQKISPWELFEGLKPSTAPL 1928- 1964 (49.00/26.38) GQSSVHQmtpssSYGLQSS..QGYTSYVSHVGLQQHTGP. 2014- 2032 (27.62/11.32) ..............GLTST..QRFS....HQTLQQ.TPMM --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 43.27| 13| 233| 962| 974| 14 --------------------------------------------------------------------------- 962- 974 (24.61/14.03) RSDG........SSAERCILA 1190- 1210 (18.66/ 8.69) QSDGnkptvgirSSCDRHLLA --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) NIFGRY 2) QQQYHIRQQQQQQQILRQQQ | 2185 2085 | 2190 2104 |
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Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab