Description | Uncharacterized protein |
Sequence | MPNGGAWRITYSLRDEHSTTAARPAPAPALAERHGHVAEASAAAEPSPAVPAAVAVAGEDERQWCGSDSSRWRGDGVPATRAVEAGSMESPTQAGAAGAVLPLPQRRRPRFPFRRHEAQSDAPKQVGSPQKSSAKLPLPMPARPGRSGVSHVRKQAQEGGNSPKKETRPKPYVLEAPPDAPSYPSNGHLDYFPWTGTHDEDSFNDNVIRQGYFDKPLTGQNEAASAKQQLYPSLRQKNGLQTLGSLFAHVLGQRRQHSQITAAPSFKPPPRVTLTDTKRETWLRDLANPLIPLRRLSRTIPHGIKNKVLLEQCTRKNVPTERAVWLAKCVGANEIRASKRKGVPGALTMGGESKWIRDWTVCVEQFVDGVVTAGGDKDWKSKVLYSIRLSAHLYSEQLLDTEHYLDWLLSSLESTPLTRLPIWLLITEVYWADILRYRKSGRRLVGALCSNLQDAHESPDRDLLLPLIERVGNILTATIRTNPENFIALTNWPKYSDTLLACNSSSEPAEAQIFDAISRRNARLKSRASNCDETQGSRRRVIDLLDASLSVQFSPDLSRECWKAMRDRALLVQTLFDWATSCARPSLMKTFVAARLMRTWSRHGIDVDESVLNYLTFRSNAPGVSSSCVYHLVSELARSGHFSVSKYIQWVIARGGLHGSKDVAPDGPCVTRLLAELPVHDLPESLLRIRKTLLNRASFHVDDETETIDNMSLAFERCSPNLYGKAPSDPEAPTTADVVQNITHLSRTVKAELGLRLRKQINLRMTKASPSDMGEWKTDPEYETATTVTVADFNFTRAVLEATEDLSMLADILKLVSTTSSTQILASIADTLNMHRLTFSAIGALNDLFDTLVARQCSLGVVQGPDSVALLHSLCALSATIPDATNVHVQLSRDVARSVRRSAVDACSPVSDHVAEALQKSDGDISDEVDKLLSSGTSMDAPTLKRLFQVLIGQMEASWAKSDCGLQKLGPILERLRTFDTKQFDNLLSPWVGQTILKTDRPNLSRVLGPLISAGCLSFKDVLKASVSSVQKTRDDGDKPMTSRIAFESLSLVLNTYRDNDIMCIEDAYTLNIKRTQAQFKDHLAILNIARIAIELSEPSVDNSDVTINLLCQGDAFRRFLQRLVLTEFDCVLKEFVAPLAKSQDIHVIYCLRAILRGLLDLKTTTTGPEDLVVARRIEVIFGVASDLTLPFCQLALRSLSASEVPGSNSEGADTSRLEAYERAVDTALANENPTWTKILPTLDPQIAQHLCERAERSLLDAIPAFKPQEGTPPPPIHDAEALAKRMLFVISATAYSTRNPNHTTALEIGEKLNNLAHALSQPYSPDTAVYAQTTIWLPIMLEFITTHASTLSPSRPATDLRARILLALSALLLALHAHVGTHELAEHVLDVSLLLVDELPDDARAQCGRFLADRGKPGGEAVVGDPGLRYVFGLETAADNGGLMLSQRGKMEGFVVRRWENLSEPTPMVGENDAALSLSLFQARRV |
Length | 1487 |
Position | Kinase |
Organism | Pseudogymnoascus sp. VKM F-4516 (FW-969) |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Leotiomycetes> Leotiomycetes incertae sedis> Pseudeurotiaceae> Pseudogymnoascus> unclassified Pseudogymnoascus. |
Aromaticity | 0.06 |
Grand average of hydropathy | -0.249 |
Instability index | 44.46 |
Isoelectric point | 6.95 |
Molecular weight | 163530.22 |
Publications |
Annotated function |
Component of the SRB8-11 complex. The SRB8-11 complex is a
regulatory module of the Mediator complex which is itself involved in
regulation of basal and activated RNA polymerase II-dependent
transcription. The SRB8-11 complex may be involved in the
transcriptional repression of a subset of genes regulated by Mediator.
It may inhibit the association of the Mediator complex with RNA
polymerase II to form the holoenzyme complex.
Component of the srb8-11 complex. The srb8-11 complex is a
regulatory module of the Mediator complex which is itself involved in
regulation of basal and activated RNA polymerase II-dependent
transcription. The srb8-11 complex may be involved in the
transcriptional repression of a subset of genes regulated by Mediator.
It may inhibit the association of the Mediator complex with RNA
polymerase II to form the holoenzyme complex.
ECO:0000256 ARBA:ARBA00002895 ECO:0000256 ARBA:ARBA00003744 |
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP01878 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 4| 159.69| 37| 37| 93| 129| 1 --------------------------------------------------------------------------- 38- 64 (35.23/16.40) .....AEASAAAEP........SP.A..VPAAVA.VAG..E.DERQW 65- 91 (21.46/ 6.72) CGS.............dssRWRGD.G..VPATRAvEAG..SmESP.. 92- 125 (57.45/32.02) ...TQAGAAGAVLPLP...QRRRP.R..FPFRRH.EAQ..S.DAPKQ 126- 165 (45.55/23.66) VGSPQKSSAK..LPLP...MPARPgRsgVSHVRK.QAQegG.NSPKK --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 4| 171.25| 40| 40| 932| 971| 2 --------------------------------------------------------------------------- 213- 232 (27.71/12.13) ............FD...KPLTGQNEAASAK......QQ.LYP 233- 253 (20.82/ 7.25) SLRQKNGLQT..LGSLFAHVLGQ................... 932- 971 (68.72/41.12) LLSSGTSMDAPTLKRLFQVLIGQMEASWAKSD.CGLQK.LGP 972- 1010 (53.99/30.71) ILERLRTFDTKQFDNLLSPWVGQ...TILKTDrPNLSRvLGP --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 104.51| 35| 39| 834| 868| 3 --------------------------------------------------------------------------- 834- 868 (60.38/33.10) MHRL.TFSA.IGALNDLFDTL...VARQCSLGVVQGPDSV 871- 910 (44.13/22.40) LHSLcALSAtIPDATNVHVQLsrdVARSVRRSAVDACSPV --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 83.87| 27| 32| 1303| 1333| 4 --------------------------------------------------------------------------- 1303- 1333 (37.13/35.16) HTTALEIgekLNNLAHALSqPYSPDTAVYAQ 1338- 1364 (46.73/29.32) LPIMLEF...ITTHASTLS.PSRPATDLRAR --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 106.30| 31| 37| 1389| 1420| 5 --------------------------------------------------------------------------- 1389- 1420 (50.06/39.35) VLDVSLLLVDELpDDARAQCGRFLADRGKPGG 1424- 1454 (56.23/38.64) VGDPGLRYVFGL.ETAADNGGLMLSQRGKMEG --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 115.44| 37| 37| 1070| 1106| 6 --------------------------------------------------------------------------- 1070- 1106 (58.70/39.37) TLNIKRTQAQFKDHLAILNIARIAIELSE...PSVDNSDV 1107- 1146 (56.75/37.80) TINLLCQGDAFRRFLQRLVLTEFDCVLKEfvaPLAKSQDI --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 105.01| 26| 28| 292| 319| 8 --------------------------------------------------------------------------- 294- 319 (47.46/33.50) RR...LSRTIP.HGIK.NKVLLEQCT.RKNVP 321- 344 (29.33/11.95) ERavwLAKCV...G.A.NEI..RASK.RKGVP 595- 622 (28.22/14.24) .R...LMRTWSrHGIDvDESVLNYLTfRSNAP --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 82.31| 25| 28| 1223| 1250| 9 --------------------------------------------------------------------------- 1223- 1250 (36.15/26.56) RAvDTALANENPTWTKILPTLDPQIaqH 1254- 1278 (46.16/23.86) RA.ERSLLDAIPAFKPQEGTPPPPI..H --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 43.88| 11| 27| 345| 355| 12 --------------------------------------------------------------------------- 345- 355 (22.06/12.60) GALTMGGESKW 369- 379 (21.82/12.39) GVVTAGGDKDW --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 58.76| 17| 174| 274| 291| 13 --------------------------------------------------------------------------- 274- 291 (27.51/20.37) LTDTkRETWLRDLANPLI 452- 468 (31.25/18.47) LQDA.HESPDRDLLLPLI --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 86.42| 27| 28| 530| 557| 14 --------------------------------------------------------------------------- 530- 557 (40.90/35.17) NCDETQGSRRRVID.LLDASLSVQfSPDL 560- 587 (45.52/33.18) ECWKAMRDRALLVQtLFDWATSCA.RPSL --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 82.12| 32| 67| 657| 691| 15 --------------------------------------------------------------------------- 670- 731 (36.73/20.38) VTRLLAELPVHDLPESLLRIRKtllnrasfhvddetetidnmslafercspnLYGKAPSDPE 738- 772 (45.38/18.96) VVQNITHLSRTVKAELGLRLRK...........................qinLRMTKASPSD --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 63.30| 21| 172| 1026| 1048| 16 --------------------------------------------------------------------------- 1026- 1048 (31.30/26.15) SVSSVQKTRDDGDKpmTSRI.AFE 1201- 1222 (32.00/18.72) SASEVPGSNSEGAD..TSRLeAYE --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) AAGAVLPL 2) ALAERHGHVAEA 3) NGGAWRITYSLRDEHSTTAAR 4) RFPFRRHE | 96 29 3 110 | 103 40 23 117 |
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Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab