Description | Mediator of RNA polymerase II transcription subunit 6 (Fragment) |
Sequence | DNLLGISWVDSSWIPILNNGSVLDYFSERSNPFYDRTCNNEVVKMQRMTLDHLNQMVGVEYILLHAQEPILFIIRKQQRQSPTQVIPLADYYIIAGVIYQAPDLGSVINSRVLTAVHGIQSAFEEAMSYCRYHPSKGYWWHFKDQEEREKAKPKAKKKEEPSSIFQRQRVDALLLDLRQKFPPRFVQQKPGEKPIPVDQIKKEPEPAPETVKPEEKDTVKNAQQSAAAKGPPEKRMRLQ |
Length | 239 |
Position | Head |
Organism | Manacus vitellinus (golden-collared manakin) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi> Archelosauria> Archosauria> Dinosauria> Saurischia> Theropoda> Coelurosauria> Aves> Neognathae> Passeriformes> Pipridae> Manacus. |
Aromaticity | 0.09 |
Grand average of hydropathy | -0.667 |
Instability index | 50.02 |
Isoelectric point | 8.90 |
Molecular weight | 27628.31 |
Publications |
Annotated function |
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GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP01841 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 72.08| 21| 42| 141| 161| 1 --------------------------------------------------------------------------- 141- 161 (37.21/22.45) HFKDQEEREKAKP..KAKKKEEP 184- 206 (34.87/20.61) RFVQQKPGEKPIPvdQIKKEPEP --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) GEKPIPVDQIKKEPEPAPETVKPEEKDTVKNAQQSAAAKGPPEKRMRLQ 2) RVDALLLDLRQKFPPRFVQ | 191 169 | 239 187 |
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