Description | Transcription elongation factor A protein 1 (Fragment) |
Sequence | LFILQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLDGPSTDKESEEKKKEPASSSQNSPEAREESSSSSNSSSRKEEGSAPSNSFIPSFPRAPSTSDSVRVKCREMLSAALRTGDDYIAIGADEEELGSQIEEDILSPIFQELKNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDKFAKMTAEEMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK |
Length | 267 |
Position | Unknown |
Organism | Manacus vitellinus (golden-collared manakin) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi> Archelosauria> Archosauria> Dinosauria> Saurischia> Theropoda> Coelurosauria> Aves> Neognathae> Passeriformes> Pipridae> Manacus. |
Aromaticity | 0.04 |
Grand average of hydropathy | -0.866 |
Instability index | 60.13 |
Isoelectric point | 8.58 |
Molecular weight | 29792.24 |
Publications |
Annotated function |
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GO - Cellular Component | nucleus GO:0005634 IEA:InterPro |
GO - Biological Function | translation elongation factor activity GO:0003746 IEA:UniProtKB-KW zinc ion binding GO:0008270 IEA:InterPro |
GO - Biological Process | regulation of transcription, DNA-templated GO:0006355 IEA:InterPro transcription, DNA-templated GO:0006351 IEA:InterPro |
Binary Interactions |
Repeats | >MDP01826 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 67.79| 22| 27| 48| 74| 1 --------------------------------------------------------------------------- 41- 63 (31.69/15.73) DGPSTDKESEEKKKEPASSSqNS 68- 89 (36.10/23.97) EESSSSSNSSSRKEEGSAPS.NS --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 76.48| 18| 27| 173| 190| 2 --------------------------------------------------------------------------- 156- 170 (16.82/ 8.77) ...KNRVRSRIANLKDAK 173- 190 (31.37/22.18) NLRKNVLCGNIPPDKFAK 203- 220 (28.29/19.34) EMRKNLTKEAIREHQMAK --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 45.31| 12| 27| 226| 237| 4 --------------------------------------------------------------------------- 226- 237 (22.42/13.06) TDLFTCGKCKKK 254- 265 (22.89/13.45) TTFVVCNECGNR --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) LIKSWKKLLD 2) SEEKKKEP | 32 49 | 41 56 |
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