<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP01821
Description |
Mediator of RNA polymerase II transcription subunit 8 (Fragment) |
Sequence | REEKQLELTLEALISQVADLKNSLVSFIYKLENEYDRLTWPSVLDSFALLSGQLNTLNKVLKHEKTPLLRNQVIIPLVLSPDRDEEIMRQTEGRVPVFSHEVVPDHLRTKPDPEVEEQEKQLITDAARISPDVAQKQIQSLNKMCSNLLEKISKEERESESGGLRQNKQTFNPADTNALVAAVAFGKGLSNRRPPGSGASVQSGQPGAGAIIAGASGMQQVPMSGAPAQQQPMLAGVQMAQAGQPGK |
Length | 247 |
Position | Head |
Organism | Struthio camelus australis |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi>
Archelosauria> Archosauria> Dinosauria> Saurischia> Theropoda>
Coelurosauria> Aves> Palaeognathae> Struthioniformes> Struthionidae>
Struthio.
|
Aromaticity | 0.03 |
Grand average of hydropathy | -0.458 |
Instability index | 49.39 |
Isoelectric point | 5.76 |
Molecular weight | 26922.28 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364144
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP01821
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 64.15| 12| 27| 195| 206| 1
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195- 206 (23.78/12.55) PGSGASV.QSGQP
222- 232 (22.81/11.79) PMSGAPA.QQ.QP
233- 245 (17.57/ 7.62) MLAGVQMaQAGQP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 82.44| 25| 27| 65| 90| 2
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65- 90 (38.07/31.05) KTPLLRNQViIPLVLSPDRDEEIMRQ
94- 118 (44.37/31.28) RVPVFSHEV.VPDHLRTKPDPEVEEQ
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 54.49| 17| 28| 8| 24| 3
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8- 24 (25.46/16.03) LTLEALISQVADLKNSL
38- 54 (29.03/19.14) LTWPSVLDSFALLSGQL
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|