Description | Transcription elongation factor A protein 1 (Fragment) |
Sequence | LFLLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLDGPSTDKDSEEKKKEPASSSQNSPEAREESSSSSNSSSRKEEGSAPSNSFIPSFPRAPSTSDSVRVKCREMLSAALRTGDDYIAIGADEEELGSQIEEDILSSPIFQELKNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDKFAKMTAEEMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK |
Length | 268 |
Position | Unknown |
Organism | Corvus brachyrhynchos (American crow) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi> Archelosauria> Archosauria> Dinosauria> Saurischia> Theropoda> Coelurosauria> Aves> Neognathae> Passeriformes> Corvoidea> Corvidae> Corvus. |
Aromaticity | 0.04 |
Grand average of hydropathy | -0.868 |
Instability index | 59.94 |
Isoelectric point | 8.58 |
Molecular weight | 29865.29 |
Publications |
Annotated function |
|
GO - Cellular Component | nucleus GO:0005634 IEA:InterPro |
GO - Biological Function | translation elongation factor activity GO:0003746 IEA:UniProtKB-KW zinc ion binding GO:0008270 IEA:InterPro |
GO - Biological Process | regulation of transcription, DNA-templated GO:0006355 IEA:InterPro transcription, DNA-templated GO:0006351 IEA:InterPro |
Binary Interactions |
Repeats | >MDP01579 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 68.15| 22| 27| 48| 74| 1 --------------------------------------------------------------------------- 41- 63 (32.00/16.57) DGPSTDKDSEEKKKEPASSSqNS 68- 89 (36.15/24.88) EESSSSSNSSSRKEEGSAPS.NS --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 36.95| 12| 18| 146| 158| 2 --------------------------------------------------------------------------- 146- 158 (16.52/15.42) FQELKNTDMKyKN 167- 178 (20.42/12.60) LKDAKNPNLR.KN --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 45.31| 12| 27| 227| 238| 3 --------------------------------------------------------------------------- 227- 238 (22.42/12.76) TDLFTCGKCKKK 255- 266 (22.89/13.14) TTFVVCNECGNR --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) LAKSLIKSWKKLLDG 2) SEEKKKE | 28 49 | 42 55 |
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Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab