<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP01498

Description Uncharacterized protein
SequenceMTSEIQITSIVNDILKVEAIEEAFSCVLVHHPNSENEKITAWQTELSSTMSNLSKEQQENAVRQFLTMAAAMTNHKRLQLLLSLLENLVTSNVLAARLVCECILNCDKLQYQLEDFWIECFVLIRHIIGGVDYKGVREIMKGCKEKAQTIPARLDASIQPQLKALENVLEYIFDRNACLLPGYFIVTEIQKAYPDGKNWPHWKLAKLLSNFVESFRNTAQMVSIVGHSKMLPVVEHTGYADLINPWVLDTTTLKFSLKGNLPYDEDLLKPQTGLLRYVLEQPYSRDMVCSMLGLQKQQKQRCIALEEQLVELVILAMERAENEMLPAEGTDGTVANHYVWLHLSSQLIYFVLFSYACFPSIVMAIHDKLAGRDLRKGRDHLMWVLLQFISGSIQRNPLSNFLPVLKLYDLLYPEKEPLPVPDYTQALCTHQMAITCIWIHLLKKAQSEHSNIHRPIPHTLKLHHEFLQHLVMPNTSLCMGSDYRIALLCNAYSTNQDYFGRPMAALVDTILGTQKGQQQQPMQTLQNNAALASGPTTPLSMSILDSLTVHSKMSLIHSIVTHVIKSAQSKSNMALAPALVETYSRLLVYTEIESLGIKGFISQLLPTVFKSHAWGTLYTLLEMFSYRMHHIQPHYRVQLLSHLHSLAAVPQTNQTQLHLCVESTALRLITGLGSAEVQPQLSRFLSEPKTLVSAESEELNRALVLTLARSMHVTGTGSDSHSGTWCKELLNTIMLNTPHSWANHTLQCFPPVLSEFFQQNSVPKENKQQIKKAVEEEYRNWASMSNENDIIAHFSVPGTPPLFLCLLWKIIFETDRISPIAYKILERIGARALSAHLRKFCDYLVFEFANSVGGQHVNKCVDTVNDMIWKYNIVTIDRLILCLVLRTHEGSDAQAIEFRNRAQEFVKENSPEHWKQSNWHEKHLAFHRKFPEKFAPEGIMEQTSGGPSQYQSLPVYFGNVCLRFLPVFDIVVHRYLEIPAVSKSLETLLEHLGCLYKFHDRPVTYLYNTLHYYERKLRDRPPLKRRLVSAVLGSLREIRAPGWALSEAYQMYMTRSSDDVVSWMPELDYYIRLVRRIVETMSGTAHFPATDWRFNEFPNPAAHALYVTCVELMAVPVAPNIVANSLLDVVAKGYTVIPSDEIHLWINCVGLLLAALPECYWSALHDRLVETISSPGLANWQYNNLTPFQMFNFNNTHNSLLENKYSYMLALAHSVWHHAGVGQITTMPQFIKEKLQPVVNSEEQLIYACHLIGPTLARFNAERPHCVVELTVCLYEMLEQVDRLQNHLQYMDPICDLLYHIKYMFVGDMTKNEVECVIRRLRPALQMRLRFIAHINIDEIQSS
Length1343
PositionTail
OrganismApis mellifera (Honeybee)
KingdomMetazoa
Lineage
Aromaticity0.09
Grand average of hydropathy-0.073
Instability index48.28
Isoelectric point6.58
Molecular weight153569.00
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP01498
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      71.27|      20|     278|     994|    1014|       2
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  994- 1014 (34.87/22.90)	CLYKFHDRpVTYLYNTLHYYE
 1273- 1292 (36.41/19.01)	CLYEMLEQ.VDRLQNHLQYMD
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     296.77|      97|     146|     649|     764|       3
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  649-  764 (147.03/139.38)	VPQTnqTQLHLC...........VESTALRLITGLGSAEVQPQLSRFlsepktlvsaeseelNRALVLTLARSM...HVTGTGSDSHSGTW......CKELLNTIMLNTPHSWANHTLQcFPPVLSEFFQQNSvPK
  796-  912 (149.75/100.14)	VPGT..PPLFLCllwkiifetdrISPIAYKILERIGARALSAHLRKF...............CDYLVFEFANSVggqHVNKCVDTVNDMIWkynivtIDRLILCLVLRTHEGSDAQAIE.FRNRAQEFVKENS.PE
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     379.92|     125|     580|     497|     634|       5
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  497-  634 (194.54/168.99)	DYFGRpmaaLVDTILGTQKGQQQQP.....MQTLQNNAA.........LASGPTTP..LSMSILDslTVHSKMSLIHSIVTHVIKSAqskSNMALApALVETY.SRL...LVYTeIESLGIKGF.ISQLLPtvFKSHAW.GTLYTLLE.MFSYRM...HHIQPH
 1068- 1218 (185.37/124.58)	DYYIR....LVRRIVETMSGTAHFPatdwrFNEFPNPAAhalyvtcveLMAVPVAPniVANSLLD..VVAKGYTVIPSDEIHLWINC...VGLLLA.ALPECYwSALhdrLVET.ISSPGLANWqYNNLTP..FQMFNFnNTHNSLLEnKYSYMLalaHSVWHH
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     160.76|      53|     575|     363|     429|       7
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  363-  429 (77.56/80.86)	MAIHDKLAGRDLRKGrdhlmwVLLQFISGSIQRNPLS........NFLPVlklYDLL...YPEkeplpVPDYTQALCT
  924-  987 (83.20/51.84)	LAFHRKFPEKFAPEG......IMEQTSGGPSQYQSLPvyfgnvclRFLPV...FDIVvhrYLE.....IPAVSKSLET
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP01498 with Med23 domain of Kingdom Metazoa
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