<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP01478

Description Uncharacterized protein
SequenceMGILYEKRPLKRPKLGPPDVYPQEPKQKEDELTSTNVKLGFATMPQMSEEFGTARHCNVTAAKVGAYFNAILAKKEELSTMPDTARKRQQINPKDNFWPVTARTKNGIEAWFKDLSGCKPLIALAKKAPNFNKKEEIFMMLCEYQVPMLRAAWFIKLSSAYTVAVSEAKIKKRQLPDPTTEWTGTLIKFLKDQLSKLQEYYHINNHITNNTNTNATPNSNNQVITGNAINEEHKIALKQWHYCVQLAKYMFEEGLLDRQELLQWILELLDKIKSSPSENGILKLLLPLALQYLEEFVQSELLARRLAYLCCRKLAHMCNNVETNANPQSPTISKNDVNIGKDTAIANQIQNPLTIAFNDYLSCPHHRDVIYSLSTIIQVITLECPTALVWNSVGEGKAPSVLNGSPLDYLQCPPTALPCPPVSATNPIIKQLKIAQKNIRARSQAAEGKWSCDKWQQSSAGITTTKVLAALDALDRHSFDRMDSSNSLDTLYAKIFTSPLKDNANERDTKTEYNPQQDSAVVEILCEWAVSAERWGEHRAMAVAKLLEKRQSEVTGETNDNDDKDSICSNGNPPVLPIFQSLLMKFLDMDAPVLDNTTTQSKVQFTNLVHLFSELIRHDVFSHDAYMCTLISRGDLIQGPAASKPGTPNNREPIDEECLFPGIETKLEVSDHGRTMDYDDSKIDDDLDKLLQHIKEDQQNSMDAPDSPKEDALAGHGTQEGLDSKIPSSHSRHLLYTTHFPLPQDETCSQHDCNQRHVLLYGVGRVRDDARHIVKRMTKEVCKLFGKKFSIDVAEGGKVKKHSRNEFNFEAITLKFQNLSYFDQHVVTWQCATQVIEMLNTFALGGSSYLPVQEHVAFLFDLMELALNIYGLIDVCIQILKELPEVETQLGVRNSQLVRSYTTSLSLYVVGVLRRYHCCLLLSPEQTTAVFDLLCKVVKHVSNPSDCSSAERCVLAHLYDLYSSCSLLKTKPHGVEAFSNAYPKIRTALYSTLQPTTSSHVYNSQFMVDVFTSPRRGGKIEPQWARQLNETPANRYSFVCNAIVAVCSETDNDKLNDIAITCAELTACCNALNAEWLGVLMALCCSSNSSTFYIDVLNQVDVQDLSIHNSLAVFTSILIARHCFSLEDFVVHIALPSLVKACNEGRGDADMEAEAGARLTCHLLLRLFKTVECPQPALYSVSTSPHPLPNGNSRGYSIKLSCDRHLLAAAHNNIRVGPVLAVLKAILVVADATAGKQPPKKPDVQMNHSNKAGGPASVGVGVGVTTGGPSELSISHILGTSDILGGGDDLGLDLAISSSSSSAGMTTENVKGLSDFAQHVLRQICSQEWVLERCLQNPEELCHPDMLLDNMLTPRQAQRLLHMICYPETSTDAFIDQKTHITNILENLEQWSLRMSWLDLQLMYKQFPPGSNELSQWLDTVAKAAIDVFQLNTMTSKSDKRSGSIWLVAPLVSKLPSAVQGRVLKVAGQVLESGNWSKTATGRERNRSKSPSLFNHQPFLSLVLTCLKGQDDQREGLLMSLHSQLSQFLNISKEEKNFATEDPKTREVLQDALQLRFSLVGGVFDTIQRNTTATTDWAILLVQLVSYGVIDLNNNSELFTTVIDMLATLIHSTLVSDSQSEKDENKKHYQNLMKKLKKELGDRNSSSIRYVRQLLPLPKLTMEVITCEPVGCLTDTKGNKIAGFDSIDKKQGLQVCDSQRVSAWEVLEGHKNPAPISWAWFRAVKLERKPLTYQNAHKLLRYHTHSQIRPPSHYLDPPPLPPEDLEPDKKESEPGKADTPMSIDSPGRVTGSVGGSGIGNTITNSKGKAMKTRRHRRNKGAATPTTPVSQQIQQPPNQLQQMAFGNQQVPVSQQPGMFTNQPPQHQQPWYTNQQTHTPAQQYGYGQQLPPTPVGPRYDRPGMNNQSKQALSHMLRLRLPSNQLINSQQQPNATPVGGPGAFQGMQRQQFIRQQLRAQHGAPNINPQQGMFASQQQQQQPQQQGMYTGMQQGMNQNYAGYGGQQMIPQQQQQQQQQQQAPQQAQQQQQLLQQQQQQQGLINQQQNMMFTNQQQIMGPQRGQEYIPQQRMQPGATRPPYLQAPNVTMNTMGPMGGGVQNQPAPPYRQTSGKPGTVGVTGVGTSNVGLQQNQQFQQQQAINQQRMRQQMLAMQQQQQAQQQQQAQQQQQQGNAAGQQPTQQLVTHLQRHLSQPPQHYQHQPPPY
Length2201
PositionKinase
OrganismApis mellifera (Honeybee)
KingdomMetazoa
Lineage
Aromaticity0.06
Grand average of hydropathy-0.496
Instability index50.37
Isoelectric point7.73
Molecular weight245843.40
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP01478
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             8|     215.42|      18|      18|    1944|    1961|       1
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 1871- 1889 (25.22/ 7.22)	TNQQT..HTPaQQ..YGYGQQLP
 1944- 1961 (31.62/10.91)	MQRQQ..FIR.QQ..LRAQHGAP
 1963- 1979 (23.64/ 6.31)	INPQQgmFAS.QQ.....QQQQP
 2005- 2019 (30.55/10.30)	IPQQQ......QQ..QQQQQQAP
 2023- 2039 (29.58/ 9.74)	QQQQQ..LLQ.QQ...QQQQGLI
 2042- 2061 (24.02/ 6.53)	QQNMM..FTN.QQqiMGPQRGQE
 2131- 2148 (26.68/ 8.06)	FQQQQ..AIN.QQ..RMRQQMLA
 2149- 2163 (24.13/ 6.60)	MQQQQ..QAQ.QQ..QQAQQ...
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      98.07|      30|      48|    1433|    1462|       3
---------------------------------------------------------------------------
 1433- 1462 (51.06/32.79)	TMTSKSDKRSGSIWLV..APLVSKLPSAVQGR
 1479- 1510 (47.01/29.54)	TATGRERNRSKSPSLFnhQPFLSLVLTCLKGQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     165.09|      40|      48|    1769|    1814|       4
---------------------------------------------------------------------------
 1769- 1800 (49.87/19.98)	..............KKESEPGKADTPMS..IDSPGR..VTGSVGGSGIGN
 1802- 1846 (48.11/27.47)	ITNSKGKAmktrrhRRNKGAATPTTPVSqqIQQPPN.....QLQQMAFGN
 2070- 2094 (32.81/10.22)	...................PG.ATRPPY..LQAPNV..TMNTMGPMGGG.
 2095- 2124 (34.30/ 9.93)	VQNQPAPP.....yRQTS..GK...........PGTvgVTG.VGTSNVG.
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     127.24|      37|      40|      77|     116|       5
---------------------------------------------------------------------------
   80-  116 (66.83/42.66)	TMPDTARKRQQINPKDNFWPVTARTKNGI..EAWFKDLS
  120-  158 (60.41/31.25)	PLIALAKKAPNFNKKEEIFMMLCEYQVPMlrAAWFIKLS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      72.50|      22|      40|    1305|    1343|       7
---------------------------------------------------------------------------
 1305- 1328 (34.79/51.14)	MTTENVkgLSDF.AQHVLRQICSQE
 1346- 1368 (37.72/13.66)	MLLDNM..LTPRqAQRLLHMICYPE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      47.00|      11|      41|    1891|    1901|       8
---------------------------------------------------------------------------
 1859- 1869 (25.19/12.12)	TNQPPQHQQPW
 1891- 1901 (21.81/ 9.25)	TPVGPRYDRPG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      67.53|      20|      46|     500|     519|       9
---------------------------------------------------------------------------
  500-  519 (34.48/28.47)	LKDNANERDTKTEYNPQQDS
  547-  566 (33.05/26.87)	LEKRQSEVTGETNDNDDKDS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     123.44|      41|      52|     771|     814|      10
---------------------------------------------------------------------------
  771-  814 (58.61/54.82)	RHIVK.RMTKEVCKLFgKKFSIDVAEGGKVKKHSrnEFNFEAITL
  824-  865 (64.83/47.09)	QHVVTwQCATQVIEML.NTFALGGSSYLPVQEHV..AFLFDLMEL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      70.54|      22|      53|     330|     353|      18
---------------------------------------------------------------------------
  330-  353 (34.29/30.91)	PT.ISKNDVNIGKDTAIANqiQNPL
  385-  407 (36.26/25.06)	PTaLVWNSVGEGKAPSVLN..GSPL
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP01478 with Med12 domain of Kingdom Metazoa
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