<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP01476

Description Uncharacterized protein
SequenceMSGLAYYQPEHPASTGVVKYPENGHDTLSDFVTFVCQEAENTQQLPQAQLAGPRTGIQKFSQYYPSSMLPPPPPAPMARPVAIIRSTGELTAASSNSPPTSSTSPTDPAELASNQEQMAAAAAVGLVSSGCQSSVDPAGRKSPARILVTAPHTSREYTFAHFHSQPGQQIFTYPTISSMSGVISPTNLSLFSSPVSVTRPVATQRSVSNVPPRWNTAPFINLEDDYNMIAPIITGTASEPPSTMDEDRYFHPVHTSSVVDKSGAGNLMGTDLGVATDPTSHHHQQAQQQQQQQQQQQQQQQQQQAQQPPQQTGQQQQQQQQQVMQDKSGRPKSPP
Length335
PositionKinase
OrganismApis mellifera (Honeybee)
KingdomMetazoa
Lineage
Aromaticity0.06
Grand average of hydropathy-0.706
Instability index68.34
Isoelectric point5.89
Molecular weight36179.47
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP01476
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      59.00|      15|      16|     287|     302|       1
---------------------------------------------------------------------------
  285-  299 (29.89/11.93)	QAQQQQQQQQQQQQQ
  301-  315 (29.10/ 7.59)	QQQQAQQPPQQTGQQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     125.84|      26|      26|      46|      71|       2
---------------------------------------------------------------------------
   46-   71 (48.39/25.40)	PQAQLAGPRTGIQKFSQYY.PSSMLPP
   73-   99 (43.31/21.96)	PPAPMARPVAIIRSTGELTaASSNSPP
  193-  212 (34.14/15.77)	SPVSVTRPVATQRSVS.......NVPP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      42.51|      13|      27|     101|     113|       3
---------------------------------------------------------------------------
  101-  113 (23.62/13.72)	SST..SPTDPAELAS
  128-  142 (18.89/ 9.50)	SSGcqSSVDPAGRKS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      51.36|      17|      21|     224|     244|       4
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  224-  242 (27.85/22.87)	DDYnmIAPIIT.................GTASEPPS
  247-  280 (23.51/ 7.00)	DRY..FHPVHTssvvdksgagnlmgtdlGVATDPTS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      44.12|      12|      21|     143|     154|       5
---------------------------------------------------------------------------
  143-  154 (21.18/ 8.75)	PARILVTAPHTS
  166-  177 (22.93/ 9.92)	PGQQIFTYPTIS
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP01476 with Med12 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) DYNMIAPIITGTASEPPSTMDEDRYFHPVHTSSVVDKSGAGNLMGTDLGVATDPTSHHHQQAQQQQQQQQQQQQQQQQQQAQQPPQQTGQQQQQQQQQVMQDKSGRPKSPP
2) PAPMARPVAIIRSTGELTAASSNSPPTSSTSPTDPAELASNQEQM
225
74
335
118










Molecular Recognition Features






MoRF SequenceStartStop




1) MSGLAYYQP
2) QAQQPPQQTGQQQQ
3) TGIQKFSQYYP
1
304
55
9
317
65