<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP01453

Description Mediator complex subunit 23
SequenceMMMRSSRPGRRHVGCRGDGGRGELLWKTEMIEEAFAGMFMDTPENERTKLISCLGAFRQYWGTLQQDSHEQCVQWIVRFIHSQHSPKRISFLYDCLAMAVETSLLPPRMVCVALISSESLEWERTRLWALTFKLIRKIIGGVDYKGVRDLLKAVLDKIQTIPITVSSAIVQQLLAAREVVEYILDRNACLLPAYFAVTEIRKLYPEGHLSHWLLGSLISDFVDSFRPTARINSICGRCSLLPVVNNSGAICNSWKLDPTTLRFPLRGMLPYDKDLFEPQTGLLRYVLEQPYSREMVCNMLGLNKQTLNIAQQKQRCLVLEEQLVDLVVYAMERSETEEHFDADIGGTSQLLWQHLSSQLIFFVLFQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNALADFLPVMKLFDLLYPEKECIPVPDISKPQSTHSFAMTCIWIHLNRKAQNDNSKLQILIPHSLKLHHEFLQQSLRNKSLGMSDYKIALLCNAYSTNSDCFSLPMGVLVETIYGNGSMRINLPGTSCMASGSVTPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAKSSVALAPALVETYSRLLVYMEIESLGIKGFISQLLPNVFKSHAWGILHTLLEMFSYRMHHIQPHYRVQLLSHLHSLAAVPQTNQNQLHLCVESTALRLITALGSSEVQPQFTRFLNDPKTVLSAESEELNRALILTLARATHVTDFFTGSDSIHGTWCKDILQTIMSFTPHNWASHTLSCFPAPLQAFFKQNNVPQESRFNLKKNVEEEYRKWKSMANENDIITHFSMQGSPPLFLCLLWKMLLETDRINQIGFRVLERIGARALVAHVRTFADFLVYEFSTSAGGQQLNKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKPSDFRNRVNDFVKENAPEHWLQSDWHNKHMNYHKKYPEKLYFEGLAEQVSPPLQLQSQYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVTYLYNTLHYYERHLRDRTNLKRKLVHAIMSSLKDNRTPGWCLSETYLKFGMNPREDNVWIPDDTYYCKLIGRLVDTMAGKSPGPFPNCDWRFNEFPNPAAHALHVTCVELMALAVPGKDVGNALLNVVLKSQPLVPRENITAWMNAIGLVITALPEPYWIVLHDRIISVLSSPALTSETEWAGDPFALLDFTACHQSYSEMNCSYVLALTHAVWHHSSIGQLSLIPKFLSETLKPIVQTELQLLYVYHLVGPFLQRFQQERTRCMLEIGVAFYEMLQAVDQHCQHLSYMDPICDFLYHIKYMYTGDSVKEQVEKIIMTLRPAMKLRLRFITHSSIIETSSSAAAAASSASASSSSAGTPQPPPSSLSSTNTAASPSSSSQHAHTPM
Length1409
PositionTail
OrganismPoecilia formosa (Amazon molly) (Limia formosa)
KingdomMetazoa
LineageEukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi> Actinopterygii> Neopterygii> Teleostei> Neoteleostei> Acanthomorphata> Ovalentaria> Atherinomorphae> Cyprinodontiformes> Poeciliidae> Poeciliinae> Poecilia.
Aromaticity0.09
Grand average of hydropathy-0.038
Instability index46.94
Isoelectric point7.96
Molecular weight160332.09
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP01453
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      55.83|      17|      19|     257|     275|       2
---------------------------------------------------------------------------
  257-  275 (28.23/22.43)	DPTT..LRFPLRGmlPYDKDL
  277-  295 (27.59/14.95)	EPQTglLRYVLEQ..PYSREM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      53.99|      15|      19|    1052|    1069|       3
---------------------------------------------------------------------------
 1052- 1069 (23.98/21.73)	MSSLKDNrtpGWCLSETY
 1074- 1088 (30.01/17.34)	MNPREDN...VWIPDDTY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      49.77|      13|      18|     915|     927|       5
---------------------------------------------------------------------------
  915-  927 (22.72/12.55)	SDFRNRVNDFVKE
  936-  948 (27.05/16.23)	SDWHNKHMNYHKK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      57.61|      15|      18|     429|     443|       7
---------------------------------------------------------------------------
  429-  443 (28.67/19.40)	CIPVPDISKPQSTHS
  448-  462 (28.94/19.67)	CIWIHLNRKAQNDNS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      43.68|      12|      19|     502|     514|       8
---------------------------------------------------------------------------
  502-  514 (19.77/16.88)	YSTNSDCFSLPmG
  521-  532 (23.91/14.53)	YGNGSMRINLP.G
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      41.18|      13|      19|    1138|    1151|       9
---------------------------------------------------------------------------
 1138- 1151 (16.97/14.29)	VPGKDVgNALLNVV
 1158- 1170 (24.20/14.85)	VPRENI.TAWMNAI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      43.82|      12|      19|     372|     383|      10
---------------------------------------------------------------------------
  372-  383 (21.06/12.06)	HMVLSLHQKLAG
  392-  403 (22.76/13.64)	HLMWVLLQFISG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      58.69|      17|      79|     795|     813|      14
---------------------------------------------------------------------------
   76-   96 (26.00/ 9.21)	IVRFIHSQHSPKrisfLYDCL
  797-  813 (32.68/21.41)	IITHFSMQGSPP....LFLCL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      37.32|      13|      20|     589|     602|      16
---------------------------------------------------------------------------
  589-  602 (17.54/15.06)	SRLL..VYmEIESLGI
  607-  621 (19.78/10.94)	SQLLpnVF.KSHAWGI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      58.01|      17|      21|     729|     747|      19
---------------------------------------------------------------------------
  729-  747 (29.91/24.13)	HGTWC.KDILQTImsFTPHN
  751-  768 (28.10/15.54)	HTLSCfPAPLQAF..FKQNN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      68.41|      20|     301|     868|     890|      24
---------------------------------------------------------------------------
  868-  890 (31.17/26.25)	IEILNDMVWkynIVTLDRLILCL
 1174- 1193 (37.24/22.14)	ITALPEPYW...IVLHDRIISVL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      59.54|      17|     462|     655|     671|      25
---------------------------------------------------------------------------
  655-  671 (31.77/22.60)	PQTNQNQLHL.CVESTAL
 1119- 1136 (27.77/18.70)	PNPAAHALHVtCVELMAL
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP01453 with Med23 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) SSASASSSSAGTPQPPPSSLSSTNTAASPSSSSQHAHTPM
1370
1409










Molecular Recognition Features






MoRF SequenceStartStop




NANANA