<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP01448
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MELAYVCDWEKRPKSTHCPSIPLVSSWSCRNLVAFTTDLKNDDDDTKDVSHMIHIIDTEHPWDVFSINSGHSEVISCLEWDQSGSRLLSADGDGRIRCWSMSEHLVNSWESALSSSVDGDPIVALSWLHNGVKLALHVEMSGSTNFGEKFSRVKFSPSLTLFGGKPMEGWLAVTVSGLVTVSLLKPGGALLTASESLCRLRGRVALADIAFTGGGNIVVAATDGSSSSPVQFYKVVVSVVSEKCRIDTELLPSLFLRCTTDPLRRDKYPAVTHLKFLTRENSEQVLLCASNQSGSIVECWSLRKEGLPVNNIFQHRSPVVGEKQPTILKWRILTTTGDLERVSAVALPKLPISISNTDLKVASDTKFCPGLGLALAFHDGSIQILHRLSLHTMGVFYGAAQRPGDDAAIKRPRTTGPALHFKALQFSWTSLALAGVDGHGKLHMLRVSPSMGQVLDMNTTLRHLLFLLEYCMVTGYDWWDVLLHVQPSMVHNLVEKLHEEYMRQNQALQQVLATRIVAVKASLCKLSTATAARACDFHAKLLLIAISSTLKSLLRPHVLNTPDKSPGDRLTEICAKNTDTDIDKVMINLKTEEFVLDGPPLQSLQQLIQWVGDFVLYLLANLPNQGSAVRPGFGFMRDGASLGMLREMLVMIRIWGLLKPGCLPTFTAMSDNQDSMQLLFRLLTKLWLCSRDDGPPQEPDESLIDECCLLPSQLLVPSMDWLPVNDGIIVKLQGKLPLRLQFGKASSLQGVGVSAPLDVFTRSPGAQKMDNLRCIHMGVSPTEESKACTRCGCVTMLRSPNKTNAMKQWEQRWIKNCLCGGLWRRMPPTFT |
Length | 831 |
Position | Tail |
Organism | Poecilia formosa (Amazon molly) (Limia formosa) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi>
Actinopterygii> Neopterygii> Teleostei> Neoteleostei> Acanthomorphata>
Ovalentaria> Atherinomorphae> Cyprinodontiformes> Poeciliidae> Poeciliinae>
Poecilia.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.019 |
Instability index | 48.51 |
Isoelectric point | 7.93 |
Molecular weight | 91788.36 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP01448
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 149.99| 48| 209| 78| 127| 2
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78- 127 (82.76/58.56) LEWDQSGSRLLSA.DGDGRI.RCWSM.SEHL.VNSWESAlSSSVDGD..PIVaLSW
277- 330 (67.23/39.52) LTRENSEQVLLCAsNQSGSIvECWSLrKEGLpVNNIFQH.RSPVVGEkqPTI.LKW
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 89.29| 27| 95| 429| 455| 3
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429- 455 (46.33/27.68) TSLALAGVDGHGKLHMLRVSPSMGQVL
528- 554 (42.96/25.18) TATAARACDFHAKLLLIAISSTLKSLL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 77.66| 23| 31| 631| 655| 8
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631- 655 (39.60/25.93) PGFGFMRDG.ASLGMLREMLvmIRIW
664- 687 (38.07/19.21) PTFTAMSDNqDSMQLLFRLL..TKLW
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 34.60| 12| 16| 732| 744| 9
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732- 744 (17.71/16.96) LQG...KLPLRLqFGK
748- 762 (16.90/ 9.42) LQGvgvSAPLDV.FTR
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