Description | Mediator of RNA polymerase II transcription subunit-like protein |
Sequence | MTSRTPMGVQQRQPQRSLSSQRPAPSQRTISQQHLPSSPARKESSFGDLTTSSDWPDALQSRHGTSTPRRGGSRLRLELSSDHGFGSQVAAESPQSFASARPLQATDGLDAANSPALSRASHQDTDNPPMPMPKRPQLTTARTPIPRRPAPAPSAAKKDNRPKPYTFEEPREAPRMPTKNRNEHRTSDPFGKGLFSGRADFYPWKGKHLEDEWTNESIGKGVWEKYSSSESSSARLAIFPALKQKTGLNALSTIFMGVLNQRRQRGQVNTPSTFKPPPRVTLTDTKREVWLRDLANPATSLRRLSRTIPHGIRGRALLDQCLNKNVPTERAVWLAKCVGANEIRAFKRKGVNGAIVMGGEIKWCKDWTVFVEQFVDSVVSATNEEGWKAKATYAIRLATSLYSEYLLDRDHYLDWVISGLEGSAQGRLPMCMLLVRIYWADMLRSRKYGRRLVAALLSHVHSIHNDPDRDILSQLGSQLSIMLASLIKSNPESFIYPSAWTRYRDTLRAVLPADDEVARKAYSRINSRNLRLAVAGNTYPPAGRQRLVRLLDSTFQNSVEADLPAKCWAASDDKAQLVKALIEWATSVHRPGLAKVYTASRLLKNFKAWSTAVPLDATTAVLEVMDDIEADDQNRKSHMYHLVSELIRDRIFSVPQYLQWLISRGGFHDESEVDPESGPCAARLLIEIPVDSLPTRLKKERANLLRRAGNYSVAAEEVDMSNGLKCVRRTLGLPLAPDDPLNQRNPMPMRKLLTRLRNSNRALKCAISSHLREVMVQQGSGGGHQHASVAMLTSVRTILEVTEDFTMLSEVVQCCLKSSDAEILAACADTINANLSIFLALGSAPESFNLLIERLRMFGQQGAVPRPLLAAVCHLAQRMPGRAEVANQLRQDLLQSDRSNAIDACSPVSDSMVPQAHAGDGELSEEIDKLLATGNRIDHPTMNRLFRTIVPRLEAGWAKGDESCRAFASLLAKMRVFDTHHFDKLMSDWISHVRSLAKRPPLPDMYPLLVTTGCLTVSALLHTANASPPMTSNPPSNVESTDGSSATYLQELLALFLTKLPKTASLTQEEVYRFHIYQEAARSDNAATLLTLIRNTIAEYAALRGQHPGLSLPLDSDNLRDRILDALRLLVVADAPAASEALSVTGLPQGATSLVSTMTTKLLLPGAAEDCPISFDQILGLATELTLPFCQLKLEFDLSVNESNPSASEDPTQSRFELFSSAMDRAIEANNITWTSMLPCLSGDISQHLKGLALGRLITLIPSLKSRQASDAVSDDHAHLAENLLGVIEAITTGQTPASSPQLTSSLADKLCDLCEIVAAKDRELDDLRATVLEHWLPAVLRLIILQGKGSDSASLAGPTAGGKPPAPVNHEARGRIVIALCSVLLELPRLPAEAVGDLAQQVFDVAILLVDDLPDDLRQQCAKNILLLPGSSTSTTLSSDPRVYYLLSTPQLTPADNLVLSHRDKSASLQSSGPRGMGAMYGIAPPIQERLTPFVMRRWEMLSESTPNIGENDTSLSLGLFEAIKIQ |
Length | 1528 |
Position | Kinase |
Organism | Acremonium chrysogenum (strain ATCC 11550 / CBS 779.69 / DSM 880 / JCM 23072 / IMI 49137) |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes> Hypocreomycetidae> Hypocreales> Hypocreales incertae sedis> Acremonium. |
Aromaticity | 0.05 |
Grand average of hydropathy | -0.276 |
Instability index | 48.01 |
Isoelectric point | 8.45 |
Molecular weight | 167788.49 |
Publications | PubMed=25291769 |
Annotated function |
Component of the SRB8-11 complex. The SRB8-11 complex is a
regulatory module of the Mediator complex which is itself involved in
regulation of basal and activated RNA polymerase II-dependent
transcription. The SRB8-11 complex may be involved in the
transcriptional repression of a subset of genes regulated by Mediator.
It may inhibit the association of the Mediator complex with RNA
polymerase II to form the holoenzyme complex.
Component of the srb8-11 complex. The srb8-11 complex is a
regulatory module of the Mediator complex which is itself involved in
regulation of basal and activated RNA polymerase II-dependent
transcription. The srb8-11 complex may be involved in the
transcriptional repression of a subset of genes regulated by Mediator.
It may inhibit the association of the Mediator complex with RNA
polymerase II to form the holoenzyme complex.
ECO:0000256 ARBA:ARBA00002895 ECO:0000256 ARBA:ARBA00003744 |
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP01335 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 250.87| 82| 89| 809| 897| 1 --------------------------------------------------------------------------- 809- 897 (123.83/94.80) SEVVQCCLKSSDAEILAACA.D.TINANLSIFLALGSAPESFNLlierLRMFgqQGAVPRpLLAA......VCHLAQRMPGRAEVANQLRQDLLQSD 899- 988 (127.04/77.96) SNAIDACSPVSDSMVPQAHAgDgELSEEIDKLLATGNRIDHPTM....NRLF..RTIVPR.LEAGwakgdeSCRAFASLLAKMRVFDTHHFDKLMSD --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 278.28| 88| 264| 1162| 1255| 2 --------------------------------------------------------------------------- 1162- 1255 (137.01/122.16) LLLPGAAEDCPISFD.QILGLateLTLPfcQLKLEFDLSVNESNPSASEDPTQSR.....FELFSSAMDRAIEANNITWtSMLPCLSGDISQHLKGLALG 1427- 1520 (141.27/104.24) LLLPGSSTSTTLSSDpRVYYL...LSTP..QLTPADNLVLSHRDKSASLQSSGPRgmgamYGIAPPIQERLTPFVMRRW.EMLSESTPNIGENDTSLSLG --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 4| 327.76| 116| 515| 485| 616| 3 --------------------------------------------------------------------------- 485- 551 (86.94/53.18) .................................................................................................................................................................................................................................................................................................................................................................................................................................................................SLIKSNPESFIYPSAW.TRYRDTLRAVL...PADDEVARKAYSRINSRNLRLAVAGnTYPPAGRQRLVRLL 552- 602 (51.63/50.83) DSTFQNSVEADLPAKCWAASDDKAQLVkALI.....EWAT.SVHRPGLAKVYTASRL............................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 995- 1056 (70.50/36.96) .........................................................lknfkawstavpldattavlevmddieaddqnrkshmyhlvselirdrifsvpqylqwlisrggfhdesevdpesgpcaarllieipvdslptrlkkeranllrragnysvaaeevdmsnglkcvrrtlglplapddplnqrnpmpmrklltrlrnsnralkcaisshlrevmvqqgsggghqhasvamltsvrtilevtedftmlsevvqcclkssdaeilaacadtinanlsiflalgsapesfnllierlrmfgqqgavprpllaavchlaqrmpgraevanqlrqdllqsdrsnaidacspvsdsmvpqahagdgelseeidkllatgnridhptmnrlfrtivprleagwakgdescrafasllakmrvfdthhfdklmsdwishvrSLAKRPPLPDMYPLLV.TTGCLTVSALLhtaNASPPMTSNPPSNVESTDGSSA....TY....LQELLALF 1064- 1155 (118.69/75.58) ASLTQEEVYRFHIYQEAARSDNAATLL.TLIrntiaEYAAlRGQHPGLSLPLDSDNL........................................................................................................................................................................................................................................................................................................................................................................................................................rDRILDALRLLV...VADAPAASEA..........LSVTG...LPQGATSLV... --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 184.25| 59| 247| 396| 457| 4 --------------------------------------------------------------------------- 396- 457 (95.25/67.52) RLATSLYSEYLLDRDHYLDWVIS..GL..EGSAQGRLPMCM..LLVRIYwADMLRSRKYGRRlvAALL 641- 705 (88.99/52.49) HLVSELIRDRIFSVPQYLQWLISrgGFhdESEVDPESGPCAarLLIEIP.VDSLPTRLKKER..ANLL --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 191.64| 56| 240| 7| 75| 5 --------------------------------------------------------------------------- 7- 68 (90.79/65.10) MGVQQRqPQ....RSLSSQRPAPSQRTISQQHLPssparKESSFGDLTTSSDWPDALQSRHGTSTP 130- 189 (100.85/46.79) MPMPKR.PQlttaRTPIPRRPAPAPSAAKKDNRP.....KPYTFEEPREAPRMPTKNRNEHRTSDP --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 76.69| 25| 515| 95| 122| 6 --------------------------------------------------------------------------- 95- 122 (38.17/27.39) QSFASARPLQAT.......DGLDAANSpalSRASH 607- 638 (38.53/19.94) KAWSTAVPLDATtavlevmDDIEADDQ...NRKSH --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 83.81| 26| 40| 285| 323| 8 --------------------------------------------------------------------------- 285- 314 (37.03/48.72) TKREVWLRDLAnPATSLRRLSRtipHGIRG 328- 353 (46.78/23.03) TERAVWLAKCV.GANEIRAFKR...KGVNG --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) AKKDNRPKPYTF 2) RLRLEL | 156 74 | 167 79 |
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Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab