Description | Mediator of RNA polymerase II transcription subunit 17 |
Sequence | MAAPAGEGTPLSLRPFPVGDKEPQTVADFIARVNAQPGGFRSLSEAALREEAARQAQGDGPPDEDDVDMSDGDGDGDGEADAVDDEAAAQDPAQARFEVLRNIDMAGNTAMLTLDTLSLLLSKQNPSQASLTLSKQLREVAGIGTLGADRLEETNVTEDKEKDQEAVAIGWTLMELSKTRDAAEAASAFLENEVESESRYWEDVVGVQSSGWSICKMPQERHTLGVKFGFDEAAPEFRNSGLAPMRRNEDGSVKLDSGALGGTSERLVVTVEKDGNVVGRSTMAPQTADDAPLEARVLEARNTLFAQELWHELGREARTLTAYDVRLQGTGLAYDMDEKTKVVVELLSLDSAPTSDGALPENDTAEAISLTLHILLSYAHRLNELMRIRPLPPHIPRSRGQHAYTLLRPIIARVIYLRNLTSTTRYIGALTKTLQKAGLEASFTLRTAQPSIPEAGATKGPNQHSAAQLLVRSMLQPPVFTMALTLLPGISVTIRGHTYLYPVTGTYYYILLPPSSPIETLCPPHKDGYTDLRSLAEYLCTAIDRLLADHFISKLPGDDWAKNVYTWRGRDEAPAPASLESVVTKISGAVVQS |
Length | 593 |
Position | Head |
Organism | Acremonium chrysogenum (strain ATCC 11550 / CBS 779.69 / DSM 880 / JCM 23072 / IMI 49137) |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes> Hypocreomycetidae> Hypocreales> Hypocreales incertae sedis> Acremonium. |
Aromaticity | 0.06 |
Grand average of hydropathy | -0.311 |
Instability index | 45.76 |
Isoelectric point | 4.83 |
Molecular weight | 64272.48 |
Publications | PubMed=25291769 |
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364140 |
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP01329 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 58.36| 17| 140| 298| 314| 1 --------------------------------------------------------------------------- 298- 314 (32.10/18.69) LEARNTL.FAQELWHELG 439- 456 (26.25/14.12) LEASFTLrTAQPSIPEAG --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 165.33| 52| 276| 242| 295| 6 --------------------------------------------------------------------------- 242- 295 (82.85/58.93) LAPMRRneDGSVKLDSGA..LGGTSERLVVT..VEK.DGNVVGRSTMAPQTADDAPLEA 521- 577 (82.48/52.59) LCPPHK..DGYTDLRSLAeyLCTAIDRLLADhfISKlPGDDWAKNVYTWRGRDEAPAPA --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) GFRSLSEAALREEAARQAQG 2) GTPLSLRPFPVGDKEPQTVADFIARVN 3) VYTWRGR | 39 8 564 | 58 34 570 |
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